Comparing Ga0059261_3964 FitnessBrowser__Korea:Ga0059261_3964 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 15 hits to proteins with known functional sites (download)
2puzB Crystal structure of imidazolonepropionase from agrobacterium tumefaciens with bound product n-formimino-l-glutamate (see paper)
63% identity, 99% coverage: 5:394/395 of query aligns to 1:400/404 of 2puzB
2gokA Crystal structure of the imidazolonepropionase from agrobacterium tumefaciens at 1.87 a resolution (see paper)
63% identity, 99% coverage: 5:394/395 of query aligns to 1:400/404 of 2gokA
Q8U8Z6 Imidazolonepropionase; Imidazolone-5-propanoate hydrolase; Imidazolone-5-propionate hydrolase; EC 3.5.2.7 from Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium tumefaciens (strain C58)) (see 2 papers)
63% identity, 99% coverage: 5:394/395 of query aligns to 15:414/419 of Q8U8Z6
2oofA The crystal structure of 4-imidazolone-5-propanoate amidohydrolase from environmental sample
55% identity, 98% coverage: 6:394/395 of query aligns to 4:398/403 of 2oofA
2q09A Crystal structure of imidazolonepropionase from environmental sample with bound inhibitor 3-(2,5-dioxo-imidazolidin-4-yl)-propionic acid (see paper)
55% identity, 98% coverage: 6:394/395 of query aligns to 3:397/402 of 2q09A
A0KF84 Imidazolonepropionase; Imidazolone-5-propionate hydrolase; EC 3.5.2.7 from Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / BCRC 13018 / CCUG 14551 / JCM 1027 / KCTC 2358 / NCIMB 9240 / NCTC 8049) (see paper)
55% identity, 98% coverage: 6:394/395 of query aligns to 9:405/411 of A0KF84
P42084 Imidazolonepropionase; Imidazolone-5-propionate hydrolase; EC 3.5.2.7 from Bacillus subtilis (strain 168) (see paper)
41% identity, 88% coverage: 48:395/395 of query aligns to 60:410/421 of P42084
2bb0A Structure of imidazolonepropionase from bacillus subtilis (see paper)
41% identity, 88% coverage: 48:395/395 of query aligns to 58:408/413 of 2bb0A
2g3fA Crystal structure of imidazolonepropionase complexed with imidazole-4- acetic acid sodium salt, a substrate homologue (see paper)
41% identity, 88% coverage: 48:395/395 of query aligns to 59:409/414 of 2g3fA
3hpaA Crystal structure of an amidohydrolase gi:44264246 from an evironmental sample of sargasso sea (see paper)
26% identity, 85% coverage: 37:372/395 of query aligns to 33:364/428 of 3hpaA
2pajA Crystal structure of an amidohydrolase from an environmental sample of sargasso sea (see paper)
26% identity, 93% coverage: 7:374/395 of query aligns to 3:358/421 of 2pajA
Q5HGN1 Dihydroorotase; DHOase; EC 3.5.2.3 from Staphylococcus aureus (strain COL)
29% identity, 26% coverage: 23:123/395 of query aligns to 13:109/424 of Q5HGN1
Sites not aligning to the query:
3griB The crystal structure of a dihydroorotase from staphylococcus aureus
29% identity, 26% coverage: 23:123/395 of query aligns to 13:109/423 of 3griB
Sites not aligning to the query:
1gkpA D-hydantoinase (dihydropyrimidinase) from thermus sp. In space group c2221 (see paper)
22% identity, 38% coverage: 30:179/395 of query aligns to 20:206/458 of 1gkpA
Sites not aligning to the query:
3e74B Crystal structure of e. Coli allantoinase with iron ions at the metal center (see paper)
29% identity, 33% coverage: 30:159/395 of query aligns to 22:160/433 of 3e74B
Sites not aligning to the query:
>Ga0059261_3964 FitnessBrowser__Korea:Ga0059261_3964
MAIPADTLWRNARLATMTGDGLGIVEQGAIAATGGTISYIGPDSDAPDAAEIVDCQGRWI
TPGLVDCHTHLVHAGNRAREFEARLEGATYEEIARAGGGILSTVTATRAASEDELIASAL
PRLDQLIAEGVTTVEIKSGYGLTLDDELKMLRAARSLGEARNVHIRTTLLAAHAVPPEYK
GDADGYVDLVCETIIPAAIGHADAVDAFCEGIGFSPEQTDRVLAAAVAHGLPVKLHAEQL
SNLHGAALAAHHNALSADHLEHLDEAGIAAMAASGTVATLLPGAFYFTREEHRPPIAALR
AAGVPIALATDCNPGTSPMASILLAANMGATFFRLTVTECLRGITVNGARALGLRTGTLE
PGGPADLAIWNVTDLAELVYRIGANPLHSRIYAGT
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory