Comparing Ga0059261_3965 FitnessBrowser__Korea:Ga0059261_3965 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 17 hits to proteins with known functional sites (download)
4f0lB Crystal structure of amidohydrolase from brucella melitensis
55% identity, 99% coverage: 7:447/447 of query aligns to 9:449/449 of 4f0lB
3mduA The structure of n-formimino-l-glutamate iminohydrolase from pseudomonas aeruginosa complexed with n-guanidino-l-glutamate (see paper)
54% identity, 91% coverage: 3:407/447 of query aligns to 3:411/450 of 3mduA
Q9HU77 Formimidoylglutamate deiminase; Formiminoglutamate deiminase; N-formimino-L-glutamate deiminase; N-formimino-L-glutamate iminohydrolase; EC 3.5.3.13 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see 2 papers)
54% identity, 91% coverage: 3:407/447 of query aligns to 4:412/453 of Q9HU77
4rdvB The structure of n-formimino-l-glutamate iminohydrolase from pseudomonas aeruginosa complexed with n-formimino-l-aspartate
54% identity, 91% coverage: 3:407/447 of query aligns to 3:411/451 of 4rdvB
3lnpA Crystal structure of amidohydrolase family protein olei01672_1_465 from oleispira antarctica (see paper)
27% identity, 86% coverage: 45:427/447 of query aligns to 58:418/441 of 3lnpA
4f0rA Crystal structure of an adenosine deaminase homolog from chromobacterium violaceum (target nysgrc-019589) bound zn and 5'- methylthioadenosine (unproductive complex)
25% identity, 84% coverage: 45:419/447 of query aligns to 57:404/436 of 4f0rA
4f0sA Crystal structure of an adenosine deaminase homolog from chromobacterium violaceum (target nysgrc-019589) with bound inosine.
25% identity, 84% coverage: 45:419/447 of query aligns to 57:404/434 of 4f0sA
4dzhA Crystal structure of an adenosine deaminase from xanthomonas campestris (target nysgrc-200456) with bound zn
27% identity, 86% coverage: 47:432/447 of query aligns to 63:421/439 of 4dzhA
3hpaA Crystal structure of an amidohydrolase gi:44264246 from an evironmental sample of sargasso sea (see paper)
23% identity, 84% coverage: 20:393/447 of query aligns to 26:370/428 of 3hpaA
Q58936 5'-deoxyadenosine deaminase; 5'-dA deaminase; 5'-methylthioadenosine deaminase; MTA deaminase; Adenosine deaminase; S-adenosylhomocysteine deaminase; SAH deaminase; EC 3.5.4.41; EC 3.5.4.31; EC 3.5.4.4; EC 3.5.4.28 from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii) (see paper)
22% identity, 86% coverage: 37:419/447 of query aligns to 38:390/420 of Q58936
8is4A Structure of an isocytosine specific deaminase vcz in complexed with 5-fu (see paper)
24% identity, 84% coverage: 37:412/447 of query aligns to 49:412/452 of 8is4A
4gbdA Crystal structure of adenosine deaminase from pseudomonas aeruginosa pao1 with bound zn and methylthio-coformycin (see paper)
28% identity, 54% coverage: 198:439/447 of query aligns to 184:427/435 of 4gbdA
Sites not aligning to the query:
4dykA Crystal structure of an adenosine deaminase from pseudomonas aeruginosa pao1 (target nysgrc-200449) with bound zn
28% identity, 54% coverage: 198:439/447 of query aligns to 184:427/437 of 4dykA
Sites not aligning to the query:
4v1xE The structure of the hexameric atrazine chlorohydrolase, atza (see paper)
24% identity, 79% coverage: 40:390/447 of query aligns to 52:400/474 of 4v1xE
P72156 Atrazine chlorohydrolase; EC 3.8.1.8 from Pseudomonas sp. (strain ADP) (see 2 papers)
24% identity, 79% coverage: 40:390/447 of query aligns to 52:400/474 of P72156
Q9EYU0 Melamine deaminase; EC 3.5.4.45 from Paracidovorax citrulli (Acidovorax citrulli) (see paper)
23% identity, 79% coverage: 40:390/447 of query aligns to 52:400/474 of Q9EYU0
2imrA Crystal structure of amidohydrolase dr_0824 from deinococcus radiodurans
26% identity, 39% coverage: 198:370/447 of query aligns to 170:359/380 of 2imrA
Sites not aligning to the query:
>Ga0059261_3965 FitnessBrowser__Korea:Ga0059261_3965
MNLWFESALLENGWSERVRLTLADGQIETVEAGVDPEAGDERHFVALPGIPNVHSHAFQR
AMAGLAEARGRADDDFWSWRELMYRFVGRIGPEECEAIAALAYAEMLESGFTRVGEFHYL
HHTPGGGRYDDVAEMSGRIAAAAAATGIALTLLPVFYAHGGFGGQPAGTAQARFLNDVDG
FAALVERAGATLASDGVIGIAPHSLRAATPGELRALLAMADRGPVHIHIAEQVKEVADCV
AWSGKRPVRWLLDNMPVDARWTLVHATHVEPGEVAGIAASGAVAGLCPITEANLGDGVFP
AAEFMALGGMIGIGSDSNVRIDAAEELRLLEYGQRLTRRARNVLAGGDRPATGARMFAAA
VAGGGRSLGVETGLAAGRPADIVSLNRDDPAFAERKGDALVDSWVFASRAGVDCVWRGGA
KQVAGGRHRDRDAIEARYRVALNRLMA
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory