Comparing H281DRAFT_01568 FitnessBrowser__Burk376:H281DRAFT_01568 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 3 hits to proteins with known functional sites (download)
P00926 D-serine dehydratase; D-serine deaminase; DSD; EC 4.3.1.18 from Escherichia coli (strain K12) (see paper)
59% identity, 97% coverage: 10:447/453 of query aligns to 6:442/442 of P00926
3ss7X Crystal structure of holo d-serine dehydratase from escherichia coli at 1.55 a resolution (see paper)
59% identity, 97% coverage: 10:447/453 of query aligns to 1:437/437 of 3ss7X
3r0xA Crystal structure of selenomethionine incorporated apo d-serine deaminase from salmonella tyhimurium (see paper)
60% identity, 94% coverage: 17:443/453 of query aligns to 11:436/438 of 3r0xA
>H281DRAFT_01568 FitnessBrowser__Burk376:H281DRAFT_01568
MIDSIYGKPLDAWLRDYPLLRPLMELQPVEWFNPAVAPLVDAIDDIPLDASDVADASARL
QRFAPLLAQTFDDVREAGGIIESPLTEVPLFADALSRRYEVETPRRLLLKQDSHLPVSGS
IKARGGIYEVLFHAEQLAIRHGLLNEGDDYRVLATDACRALFRKHSIAVGSTGNLGMSIG
IASATLGFTTTVHMSADARQWKKDRLRAHGVTVIEYAGDYGEAIESGRRLASNDPLCHFV
DDENSTTLFLGYAVAGERLKRQFDAANVPVDGGHPLFVYLPCGVGGGPGGVAFGLKLAFG
DAVHCVFAEPTHSPCMLMGVLTGLHEKLAVQDFGIDNLTAADGLAVGRPSGFVGRAMQRM
IDGYYTIDDRELYALLALMADTQAIRLEPSALAGAPGFARVLKEAQGYRARMALDDAAMR
NATHVIWATGGGMVPEVEMSAYLQTGRAALYGA
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory