Comparing H281DRAFT_01853 FitnessBrowser__Burk376:H281DRAFT_01853 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 4 hits to proteins with known functional sites (download)
P69786 PTS system glucose-specific EIICB component; EIICB-Glc; EII-Glc; EC 2.7.1.199 from Escherichia coli (strain K12) (see 5 papers)
59% identity, 81% coverage: 1:483/596 of query aligns to 1:476/477 of P69786
P09323 PTS system N-acetylglucosamine-specific EIICBA component; EIICBA-Nag; EII-Nag; EC 2.7.1.193 from Escherichia coli (strain K12) (see paper)
43% identity, 80% coverage: 6:479/596 of query aligns to 4:464/648 of P09323
Sites not aligning to the query:
6bvgA Crystal structure of bcmalt t280c-e54c crosslinked by divalent mercury (see paper)
31% identity, 66% coverage: 5:395/596 of query aligns to 1:447/447 of 6bvgA
1o2fB Complex of enzyme iiaglc and iibglc phosphocarrier protein hpr from escherichia coli nmr, restrained regularized mean structure (see paper)
61% identity, 12% coverage: 412:483/596 of query aligns to 6:77/77 of 1o2fB
>H281DRAFT_01853 FitnessBrowser__Burk376:H281DRAFT_01853
VFKHAFGVLQKVGKSLMLPVAVLPVAGLLLGLGATDFHGYVPAIVLALMKNAGDVIFANL
PLIFAIGVALGFTENDGVSGIAATIGYLVMTATLGVIAKVEGIEPDMIMGIPSIQTGVFG
GILAGGLAAWMFNRYYRIALPAYLGFFAGKRFVPIVTAIGSIVLGAILSVVWPPIGSAIK
AFSQWAAVSDPRTAATVYGFVERLLIPFGLHHIWNVPFFFEAGSFLDPTTGKVVHGDITR
FFAGDRTAGILAGAFLFKMFGLPAAAIAIWHCAKPENKVAVGGMMVSAALTSFLTGITEP
IEFAFLFVAPVLYLIHACLAASAQFVANTLGMRMGFTFSQGGIDFLMFNLIGNKSTHAWY
VFILGPIYAVIYYGVFRFVITRFDLKTPGREDDTVETAKVSTAGVGGRSRELVLAFGGRS
NIDSLDACITRLRISVKNPALVNEGKLKALGAAGVVRVGNGVQAIFGPLSENMKTDMHEY
LKTAGSEADLAADGKAVAEAAASTATAIGSAQASAHSTTQQAERVEKIRAALGGVANIQK
LDALAATRLRVGLRDASQLDTAALKAAGVPATQTLTNGEFDLIVGLDAPNLAGAMR
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory