Comparing H281DRAFT_02400 FitnessBrowser__Burk376:H281DRAFT_02400 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
5t0wA Crystal structure of the ancestral amino acid-binding protein anccdt- 1, a precursor of cyclohexadienyl dehydratase
37% identity, 88% coverage: 34:265/265 of query aligns to 1:229/229 of 5t0wA
5kkwA Crystal structure of sar11_1068 bound to a sulfobetaine (3-(1- methylpiperidinium-1-yl)propane-1-sulfonate)
29% identity, 87% coverage: 34:263/265 of query aligns to 2:231/237 of 5kkwA
3k4uE Crystal structure of putative binding component of abc transporter from wolinella succinogenes dsm 1740 complexed with lysine
27% identity, 84% coverage: 42:264/265 of query aligns to 3:226/234 of 3k4uE
4zv2A An ancestral arginine-binding protein bound to glutamine (see paper)
25% identity, 84% coverage: 42:264/265 of query aligns to 3:223/225 of 4zv2A
4zv1A An ancestral arginine-binding protein bound to arginine (see paper)
27% identity, 84% coverage: 42:264/265 of query aligns to 3:225/226 of 4zv1A
4h5fA Crystal structure of an amino acid abc transporter substrate-binding protein from streptococcus pneumoniae canada mdr_19a bound to l- arginine, form 1
28% identity, 86% coverage: 34:262/265 of query aligns to 2:233/240 of 4h5fA
6svfA Crystal structure of the p235gk mutant of argbp from t. Maritima (see paper)
25% identity, 86% coverage: 36:264/265 of query aligns to 3:227/229 of 6svfA
4i62A 1.05 angstrom crystal structure of an amino acid abc transporter substrate-binding protein abpa from streptococcus pneumoniae canada mdr_19a bound to l-arginine
24% identity, 87% coverage: 36:265/265 of query aligns to 1:232/237 of 4i62A
4ymxA Crystal structure of the substrate binding protein of an amino acid abc transporter (see paper)
25% identity, 84% coverage: 43:265/265 of query aligns to 1:223/224 of 4ymxA
8gu1A Crystal structure of putative amino acid binding periplasmic abc transporter protein from candidatus liberibacter asiaticus in complex with pimozide (see paper)
27% identity, 83% coverage: 45:264/265 of query aligns to 3:221/234 of 8gu1A
6aalA Crystal structure of putative amino acid binding periplasmic abc transporter protein from candidatus liberibacter asiaticus in complex with arginine (see paper)
27% identity, 83% coverage: 45:264/265 of query aligns to 3:221/234 of 6aalA
6a80A Crystal structure of putative amino acid binding periplasmic abc transporter protein from candidatus liberibacter asiaticus in complex with cystine (see paper)
27% identity, 83% coverage: 45:264/265 of query aligns to 3:221/234 of 6a80A
8gtuA Crystal structure of putative amino acid binding periplasmic abc transporter protein from candidatus liberibacter asiaticus in complex with clidinium (see paper)
27% identity, 83% coverage: 45:264/265 of query aligns to 5:223/236 of 8gtuA
P02910 Histidine-binding periplasmic protein; HBP from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see 2 papers)
27% identity, 85% coverage: 39:264/265 of query aligns to 24:253/260 of P02910
Sites not aligning to the query:
1hslA Refined 1.89 angstroms structure of the histidine-binding protein complexed with histidine and its relationship with many other active transport(slash)chemosensory receptors (see paper)
27% identity, 85% coverage: 39:264/265 of query aligns to 2:231/238 of 1hslA
7a99B Crystal structure of the phe57trp mutant of the arginine-bound form of domain 1 from tmargbp (see paper)
30% identity, 34% coverage: 36:126/265 of query aligns to 2:93/130 of 7a99B
Sites not aligning to the query:
5lomB Crystal structure of the pbp soca from agrobacterium tumefaciens c58 in complex with dfg at 1.5 a resolution (see paper)
22% identity, 83% coverage: 45:264/265 of query aligns to 14:231/250 of 5lomB
5l9oA Crystal structure of agrobacterium tumefaciens c58 strain pbp soca in complex with glucopine (see paper)
22% identity, 83% coverage: 45:264/265 of query aligns to 12:229/241 of 5l9oA
5l9oB Crystal structure of agrobacterium tumefaciens c58 strain pbp soca in complex with glucopine (see paper)
22% identity, 83% coverage: 45:264/265 of query aligns to 13:230/243 of 5l9oB
P0AEU0 Histidine-binding periplasmic protein; HBP from Escherichia coli (strain K12) (see 3 papers)
26% identity, 83% coverage: 45:264/265 of query aligns to 28:253/260 of P0AEU0
Sites not aligning to the query:
>H281DRAFT_02400 FitnessBrowser__Burk376:H281DRAFT_02400
MNKAAVALLGVLTGALMHTGAAQAQASATTATPSRLDEIPARGILRACTTGDYKPHSFYR
ADGQFEGIDIDMTESLAKSLGVKAEFVKTSWSNLMNDFVAKCDIGVGGVSPTLERQKRAF
FTQAFMVDGKTPIVRCDDVDKYQTVAQIDQPGTRVIVNQGGTNERFAKQFLSHASMTVYP
DNVTIFKEILAGKADVMVTDASETLLQQKLNPGLCAVHPQKPFQYGEKAWLLPRGDVAFQ
QYVDQWLHFARATGEYQAVLDKWLK
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory