SitesBLAST – Find functional sites

 

SitesBLAST

Comparing H281DRAFT_02547 FitnessBrowser__Burk376:H281DRAFT_02547 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 1 hits to proteins with known functional sites (download)

H1ZZB0 Aurachin B dehydrogenase; EC 1.1.1.394 from Stigmatella aurantiaca (see paper)
41% identity, 20% coverage: 1:59/297 of query aligns to 1:59/334 of H1ZZB0

query
sites
H1ZZB0
M
 
M
R
 
R
I
 
T
L
 
F
V
 
V
T
 
T
G
 
G
A
 
G
S
 
S
G
 
G
W
 
Y
I
 
L
G
 
G
S
 
R
A
 
N
S
 
L
V
 
L
T
 
S
E
 
A
L
 
L
I
 
V
D
 
A
A
 
R
G
 
G
H
 
I
H
 
S
V
 
V
L
 
R
G
 
A
L
 
L
A
 
V
R
 
R
N
 
S
D
 
E
E
 
E
A
 
A
A
 
A
A
 
Q
K
 
K
I
 
V
A
 
Q
A
 
A
L
 
L
G
 
G
A
 
A
E
 
Q
V
 
P
V
 
I
R
 
L
G
 
G
S
 
T
L
 
L
D
 
E
N
 
H
L
 
R
D
 
E
S
 
T
L
 
L
R
 
K

Sites not aligning to the query:

Query Sequence

>H281DRAFT_02547 FitnessBrowser__Burk376:H281DRAFT_02547
MRILVTGASGWIGSASVTELIDAGHHVLGLARNDEAAAKIAALGAEVVRGSLDNLDSLRV
AATMAEGVVHLGYNHDFSQMAAAAQTDRAAIETFADVLTGTGGPLLIASGTLGLATGRVG
IESDTPAPDGHPRLANAAYVLGLRERGIRSMVVRFAPTVHGAGGDHGFVAVLARIARQSG
ASAYIGDGQNRWPAVNRLDAGKLVRLAVDKAPAGSALHAVAEEGVATREIAGALGRFLNV
PVESIPADQAQSRFDWLSMFFGADIPASSAHTRSLLGWEPVHPTLLEDIAAGHYPGQ

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory