SitesBLAST – Find functional sites

 

SitesBLAST

Comparing H281DRAFT_03183 FitnessBrowser__Burk376:H281DRAFT_03183 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found no hits to proteins with known functional sites (download)

Query Sequence

>H281DRAFT_03183 FitnessBrowser__Burk376:H281DRAFT_03183
MQAKNEEAVTHLLNDVVEFARARLPEPTFHIVEPFLRHYYDFVDVDDLQSRSIPDLYGAA
LAHWQTAQRFVPGRERLRVYNPILEQHGWHSDHTVIEIVNDDMPFLVDSVSMAVNRQGLA
LHSVVHPVFRIWRGPDGDIARVTQGSEEAADTRSQLASFIHFEVDRCGDAAKLDALRDDI
AKVLRDVRAAVEDWPKIVELARVTIKAMKVGESGPDAMEARAFLEWMVADHFTFLGHRDY
ELVQQGTGYGLRAVPGSGLGIMRDELRATDGAAASPEVTVLPPAAAEIISSASPIFLTKA
NSRATVHRPGYLDYVGIKLAGADGKVVGERRFIGLYTSTAYFVSAAEIPIVRRKCANIVR
RAGFLPKGHLAKSLVTVLETYPRDELFQADENQLYDIALGVLRLQEHQRTRLFVRRDRFD
RFVSCLVFVPRDKYNTDLRQRIANLLTEAFNGASVEFTPLLSESTLARIHFVVHAKPGGM
PDVDTRELEARLVQVSRRWQDDLADALLDAFGEEQGNRLLQHYADSFPPGYRDDYAARTA
VRDIELIERVQGSERLAMNLYRPIEAGPRAFRFKVYRAGMPIALSRSLPMLEHLGVRVDE
ERPYLIEALGATPAWIHDFGLEVVDDAEFDIERVKDLFEDAFEQVWTGAIESDDFNRLVL
RAQLSAREVTILRAYAKYLRQVGSTFSDAYIERAVTGNPAIARMLVELFIARFDPSLAGT
RETRVENLLKTIDSALDQVPNLDEDRILRQFLGVIKATQRTNYYVFDADGQPKPYLSFKF
NPAQVPGLPEPKPMFEIWVYSPRVEGVHLRGGRVARGGLRWSDRREDFRTEVLGLMKAQM
VKNVVIVPVGSKGGFVVKNPPPQSERDAWMREGIACYQTFLRGLLDLTDNLAGTTVVPPR
DVVRHDPDDPYLVVAADKGTATFSDYANAISQEYGFWLDDAFASGGSVGYDHKKMAITAR
GAWESVKRHFREMGVDTQTMDFTVVGIGDMSGDVFGNGMLLSPHIRLVAAFDHRHIFLDP
NPDPAASIAERGRLFLLDRSSWADYDPSLISAGGGVFPRTAKTIALSPAVQSVLGISAAA
LSPAELMRAILQAPVDLLYNGGIGTYVKASRETHLQVGDRANDAIRVNGADLRCKVVAEG
GNLGLTQLGRIEFAQRGGRINTDAIDNSAGVDCSDHEVNIKILLGLVVADGEMTAKQRNA
LLAEMTDEVGLLVLTDNYYQTQALSIAGRYGVELLDAETRLMRYLERAGRLNRAIEFLPN
DEEVAERQAAKQGLTTPERAVLLAYSKMWLYDALLDSSVPEDPLVSDMLIEYFPRPLRQR
FSEPMQRHPLRREILATHLTNALVNRVGCEFVHRLMEETDAQPGDIVRACIMARDVFDLD
DVWRSIDALDNRVADDVQARMFVEVARLVERSALWFLRHLSSPGVNSDDVTGLLARCRDA
AQRLAPQWPALLPAADLEALSERQRVLVDAGVDSELAVRIASGEISAALLDIAEVASTCK
RKLELVAGVYFALGTLLNYNWISERAAALPAQSHWDMLARASALAELARLKRALTMSALA
SADDAATPDALVQAWRDKRATQLERYARLLADLRATGGASLSMLLVIVREMAALERA

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory