SitesBLAST – Find functional sites

 

SitesBLAST

Comparing H281DRAFT_03238 FitnessBrowser__Burk376:H281DRAFT_03238 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 1 hits to proteins with known functional sites (download)

P52697 6-phosphogluconolactonase; 6-P-gluconolactonase; Pgl; EC 3.1.1.31 from Escherichia coli (strain K12) (see paper)
35% identity, 90% coverage: 30:357/366 of query aligns to 6:328/331 of P52697

query
sites
P52697
Y
 
Y
M
 
I
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A
N
 
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A
 
P
D
 
E
S
 
S
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Q
D
 
Q
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H
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W
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N
L
 
L
D
 
N
T
 
-
A
 
H
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E
G
 
G
A
 
A
L
 
L
K
 
T
P
 
L
V
 
T
E
 
Q
T
 
V
V
 
V
G
 
D
L
 
V
A
 
P
G
 
G
T
 
Q
V
 
V
M
 
Q
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P
M
 
M
A
 
V
L
 
V
S
 
S
P
 
P
N
 
D
H
 
K
L
 
R
R
 
Y
L
 
L
Y
 
Y
A
 
V
G
 
G
V
 
V
R
 
R
S
 
P
K
 
E
P
 
-
Y
 
F
R
 
R
V
 
V
V
 
L
S
 
A
F
 
Y
A
 
R
I
 
I
N
 
A
P
 
P
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D
D
 
D
G
 
G
R
 
A
L
 
L
S
 
T
E
 
F
L
 
A
G
 
A
K
 
E
A
 
S
P
 
A
L
 
L
A
 
P
E
 
G
S
 
S
M
 
P
A
 
T
Y
 
H
V
 
I
S
 
S
T
 
T
D
 
D
A
 
H
S
 
Q
G
 
G
R
 
Q
Y
 
F
L
 
V
F
 
F
S
 
V
A
 
G
S
 
S
Y
 
Y
G
 
N
G
 
A
N
 
G
L
 
N
L
 
V
A
 
S
V
 
V
N
 
T
S
 
R
I
 
L
D
 
E
S
 
-
N
 
D
G
 
G
V
 
L
A
 
P
L
 
V
D
 
G
V
 
V
Q
 
V
Q
 
D
I
 
V
I
 
V
K
 
E
T
 
G
G
 
L
P
 
D
M
 
G
A
 
C
H
 
H
A
 
S
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A
R
 
N
N
 
I
A
 
S
P
 
P
D
 
D
N
 
N
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R
Y
 
T
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P
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A
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L
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D
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-
L
 
I
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C
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L
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F
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V
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S
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D
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D
G
 
G
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H
L
 
L
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V
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A
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Q
A
 
D
T
 
P
P
 
A
A
 
E
Y
 
V
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T
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T
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V
A
 
E
K
 
G
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A
G
 
G
P
 
P
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R
H
 
H
F
 
M
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V
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F
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H
P
 
P
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N
H
 
E
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Q
F
 
Y
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A
Y
 
Y
L
 
C
I
 
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N
E
 
E
L
 
L
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N
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V
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W
A
 
E
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L
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D
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E
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Q
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T
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L
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D
I
 
M
L
 
M
P
 
P
P
 
E
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N
F
 
F
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S
G
 
-
D
 
D
K
 
T
P
 
R
W
 
W
G
 
A
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A
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D
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I
H
 
H
I
 
I
T
 
T
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P
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D
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G
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R
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H
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L
Y
 
Y
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A
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R
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A
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D
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G
G
 
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E
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Q
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R
G
 
G
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F
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D
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H
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G
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x
K
Y
 
Y
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L
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A
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A
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G
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Q
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H
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V
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G
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Q
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G
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L
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L
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H
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K
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G
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R
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Y
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A
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V
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Q
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M
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V
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V
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V

Query Sequence

>H281DRAFT_03238 FitnessBrowser__Burk376:H281DRAFT_03238
MGVKAVSRVFAILLAGVTMSAATHAATYAYMSNADSQDISVFSLDTANGALKPVETVGLA
GTVMPMALSPNHLRLYAGVRSKPYRVVSFAINPLDGRLSELGKAPLAESMAYVSTDASGR
YLFSASYGGNLLAVNSIDSNGVALDVQQIIKTGPMAHAIRNAPDNRYVFASVLGSDAWLR
LKFDPSKGSLTEDATPAYSLAAKSGPRHFVFSPDHRFVYLIDELDGKLHVLAFDNQRDSV
KPVQTISILPPNFSGDKPWGADVHITPDGRFVYASERTSSTLAAYRVERASGKLTRIGTY
ATEKQPRGFNVDPSGNYLLAVGQLSTSLSAYRIDPKTGALSALGQYPVGKGANWIEIVQF
DGSNAE

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory