SitesBLAST
Comparing H281DRAFT_04737 FitnessBrowser__Burk376:H281DRAFT_04737 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
3gqtC Crystal structure of glutaryl-coa dehydrogenase from burkholderia pseudomallei with fragment (1,4-dimethyl-1,2,3,4- tetrahydroquinoxalin-6-yl)methylamine (see paper)
90% identity, 99% coverage: 5:395/396 of query aligns to 1:385/385 of 3gqtC
- active site: L135 (= L139), T136 (= T140), A250 (= A254), E365 (= E375), R377 (= R387)
- binding 1-(1,4-dimethyl-1,2,3,4-tetrahydroquinoxalin-6-yl)methanamine: W166 (= W170), K210 (= K214), L213 (= L217), T218 (= T222), Y364 (= Y374)
3eonC 2.55a crystal structure of native glutaryl-coa dehydrogenase from burkholderia pseudomallei in complex with a small molecule (see paper)
89% identity, 98% coverage: 5:394/396 of query aligns to 1:382/382 of 3eonC
3gncA Crystal structure of glutaryl-coa dehydrogenase from burkholderia pseudomallei with fragment 6421 (see paper)
89% identity, 99% coverage: 4:394/396 of query aligns to 1:380/380 of 3gncA
3d6bC 2.2 a crystal structure of glutaryl-coa dehydrogenase from burkholderia pseudomallei (see paper)
88% identity, 98% coverage: 5:394/396 of query aligns to 1:377/377 of 3d6bC
2r0nA The effect of a glu370asp mutation in glutaryl-coa dehydrogenase on proton transfer to the dienolate intermediate (see paper)
67% identity, 98% coverage: 6:395/396 of query aligns to 1:388/390 of 2r0nA
- active site: L133 (= L139), T134 (= T140), A247 (= A254), E368 (= E375), R380 (= R387)
- binding flavin-adenine dinucleotide: F131 (= F137), L133 (= L139), T134 (= T140), G139 (= G145), S140 (= S146), W166 (= W170), I167 (= I171), T168 (= T172), Y367 (= Y374), T370 (= T377), D372 (= D379)
- binding 3-thiaglutaryl-CoA: R92 (= R98), S93 (= S99), V97 (= V103), P142 (= P148), G238 (≠ R245), F241 (= F248), L244 (= L251), N245 (= N252), P318 (≠ V325), Y367 (= Y374), E368 (= E375), I377 (= I384)
1sirA The crystal structure and mechanism of human glutaryl-coa dehydrogenase (see paper)
67% identity, 98% coverage: 6:395/396 of query aligns to 1:388/390 of 1sirA
- active site: L133 (= L139), T134 (= T140), A247 (= A254), E368 (= E375), R380 (= R387)
- binding flavin-adenine dinucleotide: F131 (= F137), L133 (= L139), T134 (= T140), G139 (= G145), S140 (= S146), W166 (= W170), I167 (= I171), T168 (= T172), Y367 (= Y374), T370 (= T377)
- binding s-4-nitrobutyryl-coa: S93 (= S99), S140 (= S146), F241 (= F248), G242 (≠ T249), L244 (= L251), N245 (= N252), R248 (= R255), P318 (≠ V325), Y367 (= Y374), E368 (= E375), R380 (= R387)
2r0mA The effect of a glu370asp mutation in glutaryl-coa dehydrogenase on proton transfer to the dienolate intermediate (see paper)
67% identity, 98% coverage: 6:395/396 of query aligns to 1:388/390 of 2r0mA
- active site: L133 (= L139), T134 (= T140), A247 (= A254), D368 (≠ E375), R380 (= R387)
- binding 4-nitrobutanoic acid: L101 (= L107), Y367 (= Y374), D368 (≠ E375)
- binding flavin-adenine dinucleotide: F131 (= F137), L133 (= L139), T134 (= T140), G139 (= G145), S140 (= S146), W166 (= W170), I167 (= I171), T168 (= T172), L210 (= L217), Y367 (= Y374), T370 (= T377)
2ebaA Crystal structure of the putative glutaryl-coa dehydrogenase from thermus thermophilus
49% identity, 96% coverage: 15:395/396 of query aligns to 7:380/380 of 2ebaA
- active site: L131 (= L139), T132 (= T140), A239 (= A254), E360 (= E375), R372 (= R387)
- binding flavin-adenine dinucleotide: L131 (= L139), T132 (= T140), G136 (≠ H144), G137 (= G145), S138 (= S146), W161 (= W170), T163 (= T172), R265 (= R280), L272 (= L287), K275 (≠ N290), D333 (= D348), I334 (≠ M349), G337 (= G352), T355 (≠ V370), T358 (= T373), Y359 (= Y374), T362 (= T377)
3sf6A Crystal structure of glutaryl-coa dehydrogenase from mycobacterium smegmatis (see paper)
47% identity, 97% coverage: 10:395/396 of query aligns to 5:386/387 of 3sf6A
- active site: L134 (= L139), T135 (= T140), A245 (= A254), E366 (= E375), Q378 (≠ R387)
- binding dihydroflavine-adenine dinucleotide: F132 (= F137), L134 (= L139), T135 (= T140), G140 (= G145), S141 (= S146), W165 (= W170), I166 (= I171), T167 (= T172), S361 (≠ V370), T364 (= T373), Y365 (= Y374), T368 (= T377), E370 (≠ D379), M371 (≠ I380)
3swoA Crystal structure of a glutaryl-coa dehydrogenase from mycobacterium smegmatis in complex with fadh2 (see paper)
45% identity, 96% coverage: 16:395/396 of query aligns to 13:387/388 of 3swoA
- active site: L135 (= L139), T136 (= T140), A246 (= A254), E367 (= E375), K379 (≠ R387)
- binding dihydroflavine-adenine dinucleotide: F133 (= F137), L135 (= L139), T136 (= T140), G141 (= G145), S142 (= S146), W166 (= W170), I167 (= I171), T168 (= T172), R272 (= R280), V274 (≠ Q282), F275 (= F283), L279 (= L287), Y282 (≠ N290), T340 (≠ D348), L341 (≠ M349), G344 (= G352), I347 (= I355), T365 (= T373), Y366 (= Y374), T369 (= T377), E371 (≠ D379), M372 (≠ I380)
2ix6A Short chain specific acyl-coa oxidase from arabidopsis thaliana, acx4 (see paper)
37% identity, 98% coverage: 7:395/396 of query aligns to 33:412/416 of 2ix6A
- active site: L158 (= L139), T159 (= T140), S271 (≠ A254), E392 (= E375), R404 (= R387)
- binding flavin-adenine dinucleotide: T159 (= T140), G164 (= G145), S165 (= S146), W189 (= W170), N239 (≠ T222), R297 (= R280), F300 (= F283), L304 (= L287), F307 (≠ N290), N310 (≠ I293), E365 (≠ D348), L366 (≠ M349), G369 (= G352), I372 (= I355), Y391 (= Y374), T394 (= T377), D396 (= D379)
2ix5A Short chain specific acyl-coa oxidase from arabidopsis thaliana, acx4 in complex with acetoacetyl-coa (see paper)
37% identity, 98% coverage: 7:395/396 of query aligns to 33:412/415 of 2ix5A