Comparing H281DRAFT_05324 FitnessBrowser__Burk376:H281DRAFT_05324 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
Q0B2F6 Solute-binding protein Bamb_6123 from Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD)) (see paper)
81% identity, 100% coverage: 2:331/331 of query aligns to 1:328/328 of Q0B2F6
4n17A Crystal structure of a trap periplasmic solute binding protein from burkholderia ambifaria (bam_6123), target efi-510059, with bound beta-d-galacturonate (see paper)
84% identity, 91% coverage: 30:329/331 of query aligns to 1:300/301 of 4n17A
4n15A Crystal structure of a trap periplasmic solute binding protein from burkholderia ambifaria (bam_6123), target efi-510059, with bound beta-d-glucuronate (see paper)
84% identity, 91% coverage: 30:329/331 of query aligns to 1:300/301 of 4n15A
4n8yA Crystal structure of a trap periplasmic solute binding protein from bradyrhizobium sp. Btai1 b (bbta_0128), target efi-510056 (bbta_0128), complex with alpha/beta-d-galacturonate (see paper)
54% identity, 90% coverage: 30:328/331 of query aligns to 1:298/300 of 4n8yA
Q128M1 Solute-binding protein Bpro_3107 from Polaromonas sp. (strain JS666 / ATCC BAA-500) (see paper)
52% identity, 92% coverage: 28:331/331 of query aligns to 29:330/330 of Q128M1
4mijA Crystal structure of a trap periplasmic solute binding protein from polaromonas sp. Js666 (bpro_3107), target efi-510173, with bound alpha/beta d-galacturonate, space group p21 (see paper)
52% identity, 91% coverage: 32:331/331 of query aligns to 3:300/302 of 4mijA
4mhfA Crystal structure of a trap periplasmic solute binding protein from polaromonas sp. Js666 (bpro_3107), target efi-510173, with bound alpha/beta d-glucuronate, space group p21 (see paper)
52% identity, 91% coverage: 32:331/331 of query aligns to 3:300/301 of 4mhfA
4ovrA Crystal structure of a trap periplasmic solute binding protein from xanthobacter autotrophicus py2, target efi-510329, with bound beta-d- galacturonate (see paper)
46% identity, 91% coverage: 30:329/331 of query aligns to 1:297/298 of 4ovrA
4x8rA Crystal structure of a trap periplasmic solute binding protein from rhodobacter sphaeroides (rsph17029_2138, target efi-510205) with bound glucuronate
45% identity, 90% coverage: 32:328/331 of query aligns to 6:301/304 of 4x8rA
4pf8A Crystal structure of a trap periplasmic solute binding protein from sulfitobacter sp. Nas-14.1 (target efi-510299) with bound beta-d- galacturonate (see paper)
43% identity, 89% coverage: 32:325/331 of query aligns to 2:295/300 of 4pf8A
4p3lA Crystal structure of a trap periplasmic solute binding protein from chromohalobacter salexigens dsm 3043 (csal_2479), target efi-510085, with bound glucuronate, spg p6122 (see paper)
39% identity, 90% coverage: 32:328/331 of query aligns to 3:299/303 of 4p3lA
4ovqA Crystal structure of a trap periplasmic solute binding protein from roseobacter denitrificans, target efi-510230, with bound beta-d- glucuronate (see paper)
40% identity, 91% coverage: 32:331/331 of query aligns to 3:302/302 of 4ovqA
4xfeA Crystal structure of a trap periplasmic solute binding protein from pseudomonas putida f1 (pput_1203), target efi-500184, with bound d- glucuronate
35% identity, 90% coverage: 32:329/331 of query aligns to 3:300/306 of 4xfeA
4x04A Crystal structure of a trap periplasmic solute binding protein from citrobacter koseri (cko_04899, target efi-510094) with bound d- glucuronate
38% identity, 89% coverage: 30:325/331 of query aligns to 2:299/301 of 4x04A
4pddA Crystal structure of a trap periplasmic solute binding protein from polaromonas sp js666 (bpro_0088, target efi-510167) bound to d- erythronate (see paper)
34% identity, 84% coverage: 53:331/331 of query aligns to 25:301/303 of 4pddA
Sites not aligning to the query:
7bbrA Crystal structure of the sugar acid binding protein dctpam from advenella mimigardefordensis strain dpn7t (see paper)
33% identity, 85% coverage: 30:310/331 of query aligns to 6:287/310 of 7bbrA
7bcrA Crystal structure of the sugar acid binding protein dctpam from advenella mimigardefordensis strain dpn7t in complex with galactonate (see paper)
33% identity, 85% coverage: 30:310/331 of query aligns to 5:286/310 of 7bcrA
7bcpA Crystal structure of the sugar acid binding protein dctpam from advenella mimigardefordensis strain dpn7t in complex with gluconate (see paper)
33% identity, 85% coverage: 30:310/331 of query aligns to 5:286/310 of 7bcpA
7bcoA Crystal structure of the sugar acid binding protein dctpam from advenella mimigardefordensis strain dpn7t in complex with d-foconate (see paper)
33% identity, 85% coverage: 30:310/331 of query aligns to 5:286/310 of 7bcoA
7bcnA Crystal structure of the sugar acid binding protein dctpam from advenella mimigardefordensis strain dpn7t in complex with xylonic acid (see paper)
33% identity, 85% coverage: 30:310/331 of query aligns to 5:286/310 of 7bcnA
>H281DRAFT_05324 FitnessBrowser__Burk376:H281DRAFT_05324
MMNKKFASSRVSLIVAASVLAFGAMSAQARVFRVSDVHGDTYPTNMAVKYMGEQIKTATG
GKDSVKVFGNSALGSENDTIDQVRIGALDMARANGAAFNEIVPESMIPSLPFLFRDIDHF
RKVMYGPEGQKILDAFKAKGMIALTFYESGARSIYTKKPIRTPADMKGLKVRVQPSDLMV
DEIRAMGGTPTPMPFAEVYTGLKTGLVDAAENNLPSYEETKHFEVAPVYSETQHSMTPEV
LVFSKKVWDTLSPQEQEIIKKAAADSVPYYQKLWTARENDASKTVTKGGAQIVASSQIDR
AAFVKVMQPVWAKYEKTPQMKQLVDEIQAIK
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory