Comparing H281DRAFT_06601 FitnessBrowser__Burk376:H281DRAFT_06601 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 1 hits to proteins with known functional sites (download)
P94530 Arabinooligosaccharides transport system permease protein AraQ from Bacillus subtilis (strain 168) (see paper)
25% identity, 44% coverage: 79:200/279 of query aligns to 79:198/281 of P94530
>H281DRAFT_06601 FitnessBrowser__Burk376:H281DRAFT_06601
MKLAKPLFAPHTSLVERVWYFALRALAVLTLLYLILPVLAIVPLSFSSSTFLVYPIPGWS
LRWYQNLIASDEWRMAAKNSFIVAPSATVVATVLGTLAAIGLTKANFRGKGLLMAILISP
MIVPVVVVGVGMYLFFAPLGLANTYIGLILAHASLGVPFVVTTVAATLQGFNYNLVRASL
SLGANPVKTFFRITLPVIAPGVISGALFAFATSFDEVVVTLFLAGADQTTLPRQMFTGIR
ENISPTIAALATILIVFSTCLLLALEWLRGRNAARAIRA
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory