SitesBLAST
Comparing HSERO_RS04670 FitnessBrowser__HerbieS:HSERO_RS04670 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
3a1iA Crystal structure of rhodococcus sp. N-771 amidase complexed with benzamide (see paper)
49% identity, 98% coverage: 2:496/504 of query aligns to 1:497/508 of 3a1iA
- active site: K95 (= K96), S170 (= S171), S171 (= S172), G189 (= G190), Q191 (= Q192), G192 (= G193), G193 (= G194), A194 (≠ S195), I197 (= I198)
- binding benzamide: C144 (= C145), F145 (≠ L146), S146 (= S147), G147 (= G148), G169 (= G170), D190 (= D191), Q191 (= Q192), G192 (= G193), G193 (= G194), A194 (≠ S195), W327 (= W327), I449 (= I448)
2f2aA Structure of tRNA-dependent amidotransferase gatcab complexed with gln (see paper)
31% identity, 91% coverage: 42:502/504 of query aligns to 28:479/485 of 2f2aA
- active site: K79 (= K96), S154 (= S171), S155 (= S172), S173 (≠ G190), T175 (≠ Q192), G176 (= G193), G177 (= G194), S178 (= S195), Q181 (≠ I198)
- binding glutamine: A128 (≠ C145), M129 (≠ L146), G130 (≠ S147), S154 (= S171), D174 (= D191), T175 (≠ Q192), G176 (= G193), G177 (= G194), S178 (= S195), F206 (≠ I223), Y309 (≠ W327), Y310 (≠ Q328), R358 (≠ C378), D425 (vs. gap)
2dqnA Structure of tRNA-dependent amidotransferase gatcab complexed with asn (see paper)
31% identity, 91% coverage: 42:502/504 of query aligns to 28:479/485 of 2dqnA
- active site: K79 (= K96), S154 (= S171), S155 (= S172), S173 (≠ G190), T175 (≠ Q192), G176 (= G193), G177 (= G194), S178 (= S195), Q181 (≠ I198)
- binding asparagine: A128 (≠ C145), M129 (≠ L146), G130 (≠ S147), S154 (= S171), T175 (≠ Q192), G176 (= G193), G177 (= G194), S178 (= S195), F206 (≠ I223), Y309 (≠ W327), Y310 (≠ Q328), R358 (≠ C378), D425 (vs. gap)
3h0mA Structure of tRNA-dependent amidotransferase gatcab from aquifex aeolicus (see paper)
31% identity, 82% coverage: 88:499/504 of query aligns to 64:469/478 of 3h0mA
- active site: K72 (= K96), S147 (= S171), S148 (= S172), S166 (≠ G190), T168 (≠ Q192), G169 (= G193), G170 (= G194), S171 (= S195), Q174 (≠ I198)
- binding glutamine: A121 (≠ C145), M122 (≠ L146), G123 (≠ S147), D167 (= D191), T168 (≠ Q192), G169 (= G193), G170 (= G194), S171 (= S195), F199 (≠ I223), Y302 (≠ W327), Y303 (≠ Q328), R351 (≠ C378), D418 (vs. gap)
3h0lA Structure of tRNA-dependent amidotransferase gatcab from aquifex aeolicus (see paper)
31% identity, 82% coverage: 88:499/504 of query aligns to 64:469/478 of 3h0lA
- active site: K72 (= K96), S147 (= S171), S148 (= S172), S166 (≠ G190), T168 (≠ Q192), G169 (= G193), G170 (= G194), S171 (= S195), Q174 (≠ I198)
- binding asparagine: A121 (≠ C145), M122 (≠ L146), G123 (≠ S147), S124 (≠ G148), G146 (= G170), S147 (= S171), G169 (= G193), G170 (= G194), S171 (= S195), F199 (≠ I223), Y302 (≠ W327), Y303 (≠ Q328), R351 (≠ C378), D418 (vs. gap)
3kfuE Crystal structure of the transamidosome (see paper)
35% identity, 81% coverage: 88:496/504 of query aligns to 57:454/468 of 3kfuE
- active site: K65 (= K96), S140 (= S171), S141 (= S172), S159 (≠ G190), T161 (≠ Q192), G162 (= G193), G163 (= G194), S164 (= S195), Q167 (≠ I198)
- binding : S350 (≠ R388), G351 (vs. gap), Y352 (= Y389), Y353 (≠ Q390), E354 (≠ G391)
1m21A Crystal structure analysis of the peptide amidase pam in complex with the competitive inhibitor chymostatin (see paper)
33% identity, 81% coverage: 88:496/504 of query aligns to 73:476/487 of 1m21A
- active site: K81 (= K96), S160 (= S171), S161 (= S172), T179 (≠ G190), T181 (≠ Q192), D182 (≠ G193), G183 (= G194), S184 (= S195), C187 (≠ I198)
- binding : A129 (≠ C145), N130 (≠ L146), F131 (≠ S147), S138 (vs. gap), C158 (≠ G169), G159 (= G170), S160 (= S171), T181 (≠ Q192), D182 (≠ G193), S184 (= S195), C187 (≠ I198), I212 (= I223), R318 (≠ C332), L321 (= L335), L365 (≠ G385), W417 (≠ Q428), F426 (≠ C435)
6diiH Structure of arabidopsis fatty acid amide hydrolase in complex with methyl linolenyl fluorophosphonate (see paper)
29% identity, 81% coverage: 88:496/504 of query aligns to 197:588/616 of 6diiH
- binding methyl-9Z,12Z,15Z-octadecatrienylphosphonofluoridate: G255 (≠ C145), M256 (≠ L146), G257 (≠ S147), T258 (≠ G148), S281 (= S171), D301 (= D191), G302 (≠ Q192), G303 (= G193), S305 (= S195), V442 (≠ W327), S472 (≠ H360), I475 (≠ H363), F476 (≠ W364), I532 (≠ V441), M539 (≠ I448)
Sites not aligning to the query:
Q7XJJ7 Fatty acid amide hydrolase; AtFAAH; N-acylethanolamine amidohydrolase; EC 3.5.1.99 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
29% identity, 81% coverage: 88:496/504 of query aligns to 197:588/607 of Q7XJJ7
- K205 (= K96) mutation to A: Loss of activity.
- SS 281:282 (= SS 171:172) mutation to AA: Loss of activity.
- GGGS 302:305 (≠ QGGS 192:195) binding
- S305 (= S195) mutation to A: Loss of activity.
- R307 (= R197) mutation to A: Loss of activity.
- S360 (≠ A250) mutation to A: No effect.
4yjiA The crystal structure of a bacterial aryl acylamidase belonging to the amidase signature (as) enzymes family (see paper)
28% identity, 85% coverage: 77:504/504 of query aligns to 60:481/490 of 4yjiA
- active site: K79 (= K96), S158 (= S171), S159 (= S172), G179 (≠ Q192), G180 (= G193), G181 (= G194), A182 (≠ S195)
- binding n-(4-hydroxyphenyl)acetamide (tylenol): L81 (≠ N98), F82 (≠ V99), Y131 (≠ F144), G132 (≠ C145), S158 (= S171), T177 (≠ G190), D178 (= D191), G179 (≠ Q192), G180 (= G193), G181 (= G194), A182 (≠ S195), I321 (= I330)
6c6gA An unexpected vestigial protein complex reveals the evolutionary origins of an s-triazine catabolic enzyme. Inhibitor bound complex. (see paper)
27% identity, 86% coverage: 66:496/504 of query aligns to 30:448/457 of 6c6gA