SitesBLAST
Comparing HSERO_RS05115 HSERO_RS05115 aldehyde dehydrogenase to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
6mvtA Structure of a bacterial aldh16 complexed with nadh (see paper)
58% identity, 98% coverage: 15:792/793 of query aligns to 1:751/751 of 6mvtA
- active site: N151 (= N167), E247 (= E264), C281 (= C298), E450 (= E472)
- binding 1,4-dihydronicotinamide adenine dinucleotide: V147 (≠ I163), I148 (≠ V164), P149 (= P165), W150 (= W166), K174 (= K190), P175 (= P191), A176 (= A192), E177 (= E193), D206 (= D222), G207 (= G223), G210 (= G226), E211 (≠ A227), F223 (= F240), G225 (= G242), S226 (= S243), V229 (= V246), R232 (≠ L249), Q279 (= Q296), D327 (≠ V344), Q328 (= Q345), A330 (≠ E347), R331 (= R348)
6mvsA Structure of a bacterial aldh16 complexed with NAD (see paper)
58% identity, 98% coverage: 15:792/793 of query aligns to 1:751/751 of 6mvsA
- active site: N151 (= N167), E247 (= E264), C281 (= C298), E450 (= E472)
- binding nicotinamide-adenine-dinucleotide: V147 (≠ I163), I148 (≠ V164), P149 (= P165), W150 (= W166), K174 (= K190), P175 (= P191), A176 (= A192), E177 (= E193), D206 (= D222), G207 (= G223), G210 (= G226), E211 (≠ A227), F223 (= F240), G225 (= G242), S226 (= S243), V229 (= V246), I233 (= I250), Q279 (= Q296)
6mvuA Structure of a bacterial aldh16 active site mutant c295a complexed with p-nitrophenylacetate (see paper)
57% identity, 98% coverage: 15:792/793 of query aligns to 1:751/752 of 6mvuA
- active site: N151 (= N167), E247 (= E264), A281 (≠ C298), E450 (= E472)
- binding 4-nitrophenyl acetate: V147 (≠ I163), K174 (= K190), G207 (= G223), G210 (= G226), E211 (≠ A227), V214 (= V230), V229 (= V246), R232 (≠ L249), I233 (= I250), A236 (≠ Q253)
6b5hA Aldh1a2 liganded with NAD and 1-(4-cyanophenyl)-n-(3-fluorophenyl)-3- [4-(methylsulfonyl)phenyl]-1h-pyrazole-4-carboxamide (compound cm121) (see paper)
45% identity, 54% coverage: 52:481/793 of query aligns to 33:477/492 of 6b5hA
- active site: N161 (= N167), E260 (= E264), C294 (= C298), E468 (= E472)
- binding 1-(4-cyanophenyl)-N-(3-fluorophenyl)-3-[4-(methylsulfonyl)phenyl]-1H-pyrazole-4-carboxamide: V112 (= V128), G116 (≠ L132), F162 (= F168), L165 (= L171), W169 (= W175), Q284 (≠ D288), F288 (= F292), C293 (≠ V297), C294 (= C298), T295 (≠ C299), N449 (= N453), L451 (≠ F455), N452 (≠ D456), A453 (= A457), F457 (= F461)
- binding nicotinamide-adenine-dinucleotide: I157 (= I163), I158 (≠ V164), P159 (= P165), W160 (= W166), N161 (= N167), K184 (= K190), A186 (= A192), E187 (= E193), G217 (= G223), P218 (≠ A224), G221 (= G226), A222 (= A227), F235 (= F240), T236 (= T241), G237 (= G242), S238 (= S243), V241 (= V246), I245 (= I250), E260 (= E264), L261 (= L265), G262 (= G266), C294 (= C298), E391 (= E395), F393 (= F397), F457 (= F461)
6b5gA Aldh1a2 liganded with NAD and (3-ethoxythiophen-2-yl){4-[4-nitro-3- (pyrrolidin-1-yl)phenyl]piperazin-1-yl}methanone (compound 6-118) (see paper)
45% identity, 54% coverage: 52:481/793 of query aligns to 33:477/492 of 6b5gA
- active site: N161 (= N167), E260 (= E264), C294 (= C298), E468 (= E472)
- binding (3-ethoxythiophen-2-yl){4-[4-nitro-3-(pyrrolidin-1-yl)phenyl]piperazin-1-yl}methanone: V112 (= V128), F162 (= F168), L165 (= L171), M166 (= M172), W169 (= W175), F288 (= F292), C293 (≠ V297), C294 (= C298), T295 (≠ C299), N449 (= N453), L451 (≠ F455)
- binding nicotinamide-adenine-dinucleotide: I157 (= I163), I158 (≠ V164), P159 (= P165), W160 (= W166), N161 (= N167), M166 (= M172), K184 (= K190), E187 (= E193), G217 (= G223), P218 (≠ A224), G221 (= G226), A222 (= A227), F235 (= F240), T236 (= T241), G237 (= G242), S238 (= S243), V241 (= V246), I245 (= I250), E260 (= E264), L261 (= L265), G262 (= G266), C294 (= C298), E391 (= E395), F393 (= F397), F457 (= F461)
6aljA Aldh1a2 liganded with NAD and compound win18,446 (see paper)
45% identity, 54% coverage: 52:481/793 of query aligns to 33:477/492 of 6aljA
- active site: N161 (= N167), E260 (= E264), C294 (= C298), E468 (= E472)
- binding N,N'-(octane-1,8-diyl)bis(2,2-dichloroacetamide): G116 (≠ L132), T120 (≠ H136), N161 (= N167), F162 (= F168), L165 (= L171), M166 (= M172), W169 (= W175), E260 (= E264), C293 (≠ V297), C294 (= C298), T295 (≠ C299), L451 (≠ F455), N452 (≠ D456), A453 (= A457), M469 (≠ G473)
- binding nicotinamide-adenine-dinucleotide: I157 (= I163), I158 (≠ V164), P159 (= P165), W160 (= W166), N161 (= N167), K184 (= K190), A186 (= A192), E187 (= E193), G217 (= G223), G221 (= G226), A222 (= A227), F235 (= F240), T236 (= T241), G237 (= G242), S238 (= S243), V241 (= V246), E260 (= E264), L261 (= L265), C294 (= C298), K340 (≠ V344), Q341 (= Q345), K344 (≠ R348), E391 (= E395), F393 (= F397)
O94788 Retinal dehydrogenase 2; RALDH 2; RalDH2; Aldehyde dehydrogenase family 1 member A2; Retinaldehyde-specific dehydrogenase type 2; RALDH(II); EC 1.2.1.36 from Homo sapiens (Human) (see 6 papers)
45% identity, 54% coverage: 52:481/793 of query aligns to 59:503/518 of O94788
- A110 (= A100) to V: in dbSNP:rs35365164
- Q182 (= Q162) to K: in DIH4; decreased retinoic acid biosynthetic process
- IPW 184:186 (≠ VPW 164:166) binding
- KPAE 210:213 (= KPAE 190:193) binding
- STE 264:266 (= STE 243:245) binding
- C320 (= C298) active site, Nucleophile
- R347 (≠ L325) to H: in DIH4; decreased expression
- V348 (≠ K326) to I: in dbSNP:rs4646626
- KQYNK 366:370 (≠ VQLER 344:348) binding
- A383 (= A361) to T: in DIH4; unknown pathological significance
- E417 (= E395) binding
- E436 (≠ Q414) to K: in dbSNP:rs34744827
- S461 (≠ A439) to Y: in DIH4; decreased retinoic acid biosynthetic process
Sites not aligning to the query:
- 50 E → G: in dbSNP:rs34266719
7radA Crystal structure analysis of aldh1b1
44% identity, 55% coverage: 45:481/793 of query aligns to 27:478/493 of 7radA