Comparing HSERO_RS06525 FitnessBrowser__HerbieS:HSERO_RS06525 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
2xuaH Crystal structure of the enol-lactonase from burkholderia xenovorans lb400 (see paper)
49% identity, 99% coverage: 1:258/261 of query aligns to 1:260/261 of 2xuaH
4uhdA Structural studies of a thermophilic esterase from thermogutta terrifontis (acetate bound) (see paper)
33% identity, 97% coverage: 4:257/261 of query aligns to 10:267/274 of 4uhdA
4uheA Structural studies of a thermophilic esterase from thermogutta terrifontis (malate bound) (see paper)
33% identity, 97% coverage: 4:257/261 of query aligns to 10:267/272 of 4uheA
4uhfA Structural studies of a thermophilic esterase from thermogutta terrifontis (l37a mutant with butyrate bound) (see paper)
33% identity, 97% coverage: 4:257/261 of query aligns to 10:267/278 of 4uhfA
6eb3B Structural and enzymatic characterization of an esterase from a metagenomic library
33% identity, 100% coverage: 1:260/261 of query aligns to 1:266/268 of 6eb3B
6eb3A Structural and enzymatic characterization of an esterase from a metagenomic library
33% identity, 100% coverage: 1:260/261 of query aligns to 1:263/265 of 6eb3A
6eb3C Structural and enzymatic characterization of an esterase from a metagenomic library
32% identity, 100% coverage: 1:260/261 of query aligns to 1:260/262 of 6eb3C
4ihaA Crystal structure of rice dwarf14 (d14) in complex with a gr24 hydrolysis intermediate (see paper)
26% identity, 82% coverage: 23:235/261 of query aligns to 21:241/268 of 4ihaA
Sites not aligning to the query:
5zhsA Crystal structure of osd14 in complex with covalently bound kk052 (see paper)
26% identity, 82% coverage: 23:235/261 of query aligns to 17:237/264 of 5zhsA
6ap8A Crystal structure of rice d14 bound to 2-(2-methyl-3-nitroanilino) benzoic acid (see paper)
26% identity, 82% coverage: 23:235/261 of query aligns to 19:239/266 of 6ap8A
Sites not aligning to the query:
5dj5A Crystal structure of rice dwarf14 in complex with synthetic strigolactone gr24 (see paper)
26% identity, 82% coverage: 23:235/261 of query aligns to 19:239/266 of 5dj5A
Sites not aligning to the query:
5zhtA Crystal structure of osd14 in complex with covalently bound kk073 (see paper)
26% identity, 82% coverage: 23:235/261 of query aligns to 18:238/265 of 5zhtA
5zhrA Crystal structure of osd14 in complex with covalently bound kk094 (see paper)
26% identity, 82% coverage: 23:235/261 of query aligns to 18:238/265 of 5zhrA
5yz7A Crystal structure of osd14 in complex with d-ring-opened 7'-carba-4bd (see paper)
26% identity, 82% coverage: 23:235/261 of query aligns to 18:238/265 of 5yz7A
Q10QA5 Strigolactone esterase D14; Protein DWARF 14; Protein DWARF 88; Protein HIGH-TILLERING DWARF 2; EC 3.1.-.- from Oryza sativa subsp. japonica (Rice) (see 4 papers)
26% identity, 82% coverage: 23:235/261 of query aligns to 71:291/318 of Q10QA5
Sites not aligning to the query:
5h3hB Esterase (eaest) from exiguobacterium antarcticum (see paper)
23% identity, 85% coverage: 35:257/261 of query aligns to 35:266/269 of 5h3hB
Sites not aligning to the query:
6brtA F-box protein cth with hydrolase (see paper)
26% identity, 82% coverage: 23:235/261 of query aligns to 38:258/285 of 6brtA
Q9SQR3 Strigolactone esterase D14; Protein DWARF 14; AtD14; EC 3.1.-.- from Arabidopsis thaliana (Mouse-ear cress) (see 4 papers)
24% identity, 81% coverage: 23:234/261 of query aligns to 21:240/267 of Q9SQR3
5cbkA Crystal structure of the strigolactone receptor shhtl5 from striga hermonthica (see paper)
22% identity, 81% coverage: 24:235/261 of query aligns to 20:240/271 of 5cbkA
Sites not aligning to the query:
8dvcA Receptor shhtl5 from striga hermonthica in complex with strigolactone agonist gr24 (see paper)
21% identity, 81% coverage: 24:235/261 of query aligns to 18:238/268 of 8dvcA
Sites not aligning to the query:
>HSERO_RS06525 FitnessBrowser__HerbieS:HSERO_RS06525
MPFANVNAIRLHYQLEGDASLPVLVLSNSLGTSLSMWDPQMPQWLQHFRVLRYDTRGHGQ
SEVTPGECSIAQLGSDVIALLDHLGIAQAHFCGLSMGGSTFMWLAVHHPQRINKLILCNT
GAKIGTAEAWNSRIETVRREGLGAIAGAVVSRWLTPEYAQAHPQQVQALTAMLLATPAEG
YAAACAAVRDHDLREAIAGIRAPTLIIAGSGDVPTPPADAQFMRATIPGAQYVEFDAAHI
SNQQQAAAFTQAVVQFLTGQP
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory