Comparing HSERO_RS11690 FitnessBrowser__HerbieS:HSERO_RS11690 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 16 hits to proteins with known functional sites (download)
3p47A Crystal structure of entamoeba histolytica serine acetyltransferase 1 in complex with l-cysteine (see paper)
38% identity, 93% coverage: 1:287/307 of query aligns to 3:265/270 of 3p47A
3q1xA Crystal structure of entamoeba histolytica serine acetyltransferase 1 in complex with l-serine (see paper)
38% identity, 93% coverage: 1:287/307 of query aligns to 1:263/267 of 3q1xA
7bw9A Crystal structure of serine acetyltransferase isoform 3 in complex with cysteine from entamoeba histolytica
38% identity, 90% coverage: 31:305/307 of query aligns to 25:277/280 of 7bw9A
4n69A Soybean serine acetyltransferase complexed with serine (see paper)
45% identity, 55% coverage: 117:285/307 of query aligns to 71:230/243 of 4n69A
6wyeA Crystal structure of neisseria gonorrhoeae serine acetyltransferase (cyse) (see paper)
41% identity, 54% coverage: 121:285/307 of query aligns to 77:232/261 of 6wyeA
7ra4A Crystal structure of neisseria gonorrhoeae serine acetyltransferase (cyse) in complex with serine (see paper)
41% identity, 54% coverage: 121:285/307 of query aligns to 75:230/243 of 7ra4A
4n6bA Soybean serine acetyltransferase complexed with coa (see paper)
44% identity, 55% coverage: 117:285/307 of query aligns to 67:220/233 of 4n6bA
Sites not aligning to the query:
3gvdI Crystal structure of serine acetyltransferase cyse from yersinia pestis
42% identity, 51% coverage: 129:286/307 of query aligns to 87:235/272 of 3gvdI
1t3dA Crystal structure of serine acetyltransferase from e.Coli at 2.2a (see paper)
39% identity, 57% coverage: 111:285/307 of query aligns to 67:231/262 of 1t3dA
4h7oA Crystal structure of serine acetyltransferase from vibrio cholerae o1 biovar el tor n16961
39% identity, 57% coverage: 111:285/307 of query aligns to 63:227/258 of 4h7oA
Sites not aligning to the query:
8i04A Crystal structure of serine acetyltransferase from salmonella typhimurium complexed with serine (see paper)
38% identity, 57% coverage: 111:285/307 of query aligns to 63:227/258 of 8i04A
8i09A Crystal structure of serine acetyltransferase from salmonella typhimurium complexed with butyl gallate (see paper)
38% identity, 57% coverage: 111:285/307 of query aligns to 66:230/246 of 8i09A
Sites not aligning to the query:
8i06A Crystal structure of serine acetyltransferase from salmonella typhimurium complexed with coa (see paper)
38% identity, 57% coverage: 111:285/307 of query aligns to 67:231/244 of 8i06A
Sites not aligning to the query:
1ssqD Serine acetyltransferase- complex with cysteine (see paper)
39% identity, 56% coverage: 118:288/307 of query aligns to 69:230/257 of 1ssqD
4hzdA Crystal structure of serine acetyltransferase in complex with coenzyme a from brucella abortus strain s19 (see paper)
35% identity, 58% coverage: 120:296/307 of query aligns to 75:242/250 of 4hzdA
Sites not aligning to the query:
1sstA Serine acetyltransferase- complex with coa (see paper)
38% identity, 56% coverage: 118:288/307 of query aligns to 69:223/233 of 1sstA
Sites not aligning to the query:
>HSERO_RS11690 FitnessBrowser__HerbieS:HSERO_RS11690
MANFDIHQIVQSLHEARVGWRVAQRRNNDSSGREFPSRDALDGIVTTLKGVLFPMRLGPP
DLRQESENFHVAHALDAALHALLGQVRLELKYSAGLSGRPTPNLEQDAISITRAFGASLP
QIRSQLDTDVLAAYQGDPAARSVDEVLLCYPGALAMIHYRLAHRLYQLGLPLLARIIAEL
AHAATGIDIHPGAQIGTGFFIDHGTGVVIGETAVIGNNVRIYQAVTLGAKRFPTDADGKL
EKGRARHPIVEDDVVIYAGATILGRIRLGRGAVIGGNVWLTHDVPAGAHISQAASREDSL
SLANAGA
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory