Comparing HSERO_RS17580 FitnessBrowser__HerbieS:HSERO_RS17580 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
6io1B Crystal structure of a novel thermostable (s)-enantioselective omega- transaminase from thermomicrobium roseum (see paper)
39% identity, 95% coverage: 17:436/440 of query aligns to 35:444/448 of 6io1B
Sites not aligning to the query:
5lhaA Amine transaminase crystal structure from an uncultivated pseudomonas species in the pmp-bound form
37% identity, 97% coverage: 10:436/440 of query aligns to 22:444/447 of 5lhaA
5lh9D Amine transaminase crystal structure from an uncultivated pseudomonas species in the plp-bound (internal aldimine) form
37% identity, 97% coverage: 10:436/440 of query aligns to 24:446/449 of 5lh9D
Q94CE5 Gamma-aminobutyrate transaminase POP2, mitochondrial; AtGABA-T; Gamma-aminobutyric acid aminotransferase 1; Protein HEXENAL RESPONSE 1; Protein POLLEN-PISTIL INCOMPATIBILITY 2; AtPOP2; EC 2.6.1.96 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
34% identity, 97% coverage: 14:438/440 of query aligns to 70:491/504 of Q94CE5
5kr6B Directed evolution of transaminases by ancestral reconstruction. Using old proteins for new chemistries
35% identity, 99% coverage: 3:437/440 of query aligns to 16:455/460 of 5kr6B
5kr5A Directed evolution of transaminases by ancestral reconstruction. Using old proteins for new chemistries
36% identity, 93% coverage: 19:428/440 of query aligns to 36:442/455 of 5kr5A
Sites not aligning to the query:
6s54A Transaminase from pseudomonas fluorescens (see paper)
34% identity, 99% coverage: 2:438/440 of query aligns to 14:451/453 of 6s54A
D6R3B6 Vanillin aminotransferase; Putative aminotransferase; pAMT; EC 2.6.1.119 from Capsicum frutescens (Cayenne pepper) (Tabasco pepper) (see paper)
35% identity, 93% coverage: 20:429/440 of query aligns to 34:438/459 of D6R3B6
6g4fA Crystal structure of the omega transaminase from pseudomonas jessenii in complex with pmp (see paper)
37% identity, 95% coverage: 19:435/440 of query aligns to 32:442/451 of 6g4fA
Sites not aligning to the query:
6g4eA Crystal structure of the omega transaminase from pseudomonas jessenii in complex with plp and 6-aminohexanoate (6-aca) (see paper)
37% identity, 95% coverage: 19:435/440 of query aligns to 32:442/451 of 6g4eA
Sites not aligning to the query:
6g4dB Crystal structure of the omega transaminase from pseudomonas jessenii in complex with plp (see paper)
37% identity, 95% coverage: 19:435/440 of query aligns to 32:442/453 of 6g4dB