Comparing HSERO_RS17870 FitnessBrowser__HerbieS:HSERO_RS17870 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 1 hits to proteins with known functional sites (download)
1sz2B Crystal structure of e. Coli glucokinase in complex with glucose (see paper)
42% identity, 94% coverage: 18:329/333 of query aligns to 5:316/320 of 1sz2B
>HSERO_RS17870 FitnessBrowser__HerbieS:HSERO_RS17870
MQHVPTSPAGLHADGPRLLADIGGTNARFALETGPGRIEQVQILRGADYGEFTDAVQAYL
KLAGHPPVRHAVVAIANPVQGDQIKMTNHDWAFSIEAARQLLGFELLLVVNDFTALSMAV
PQLRADELQQVGGGAPKPGAPIGLVGAGTGLGVGGLLHADGHWLPLASEGGHAAFAPADP
REAAVLAYAWQFHEHVSAERLVSGPGLELIHRALLAIDGHPAAELSAAQIVEGARQHGDA
LCQETLALFCSMLGTVAADLALTLGALGGIYIGVGVVPHLGDYFARSPFRARFENKGRMS
VLTKAIPTYVITAEYPAFTGVSAILADRLATQQ
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory