Comparing HSERO_RS19355 FitnessBrowser__HerbieS:HSERO_RS19355 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 1 hits to proteins with known functional sites (download)
6u7lA 2.75 angstrom crystal structure of galactarate dehydratase from escherichia coli. (see paper)
36% identity, 94% coverage: 8:489/511 of query aligns to 7:438/460 of 6u7lA
>HSERO_RS19355 FitnessBrowser__HerbieS:HSERO_RS19355
MKAHSPVIRLNPVDDVVIARQQLISGTVLQDEGGLKVQGLIPAGHKMATRAITAGEPVKR
YGQIIGTASQDIAPGQHVHTHNLAMAEFSREHHFGADVKPVDFVATPATFMGIVRPDGRV
ATRNYIGVLTSVNCSATAARAIADYFRRDIHPEVLADYPNIDGVVALTHGQGCALDSQGE
PLQILRRTLAGYATHPNFAAVLVVGLGCETNQISGLMESHNLKEGEYFHTFTIQGTGGTA
KTVALGIEKIKKMLPKANDIKREPVSAKHLTLGLQCGGSDGYSGITANPALGAAVDLLVR
HGGTAILSETPEIYGAEHLLTRRAVSPEVGEKLLARIAWWEEYCAKNDAEMNNNPSAGNK
AGGLTTILEKSLGAVAKGGTTNLVDVYKYAEAVTARGFVFMDTPGYDPISATGQVAGGAN
MICFTTGRGSAYGCAPAPSLKLATNTALWQRQEEDMDINCGEIADGNVTPQEIGERFFQM
ILDTASGKKTKSELHGYGQDEFVPWHIGVYT
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory