SitesBLAST

Comparing HSERO_RS21380 FitnessBrowser__HerbieS:HSERO_RS21380 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found no hits to proteins with known functional sites (download)

Query Sequence

>HSERO_RS21380 FitnessBrowser__HerbieS:HSERO_RS21380
MNAPLPAGQRLLLDDVSLDDKYTLERGRVFMTGIQALVRLPMLQRQYDQRAGLNTAGFIT
GYRGSPLGAVDQTAEKARKYLEAKQIKFHPGMNEDLAATSVWGTQQVNLFKGAQYDGVFS
LWYGKGPGVDRCGDVFKHANMAGTSRHGGVLVIAGDDHAAKSSTAAHQSEHILKACGIPV
LYPSSVQEYLDYGLHGWAMSRYTGLWVAMKCVTDLVESGMSVMIDPERVQIQLPADFELP
PDGLNIRQPDTVLGQEARMINYKWYAALAYARANKLNRIIWDSPRARIGIITAGKSYLDT
RQALEDLGIDEQAARDIGIRLYKVGMTWPLEAEGVREFAQGLDEILVVEEKRQILEYQLK
EELYNWRDDVRPRVVGKFDDTGEWSGSQREGHGNWLLPATYELNPAQIARAIATRISRYF
AGHPVEQQVRARVAYLEAKEATLNISSKPDPDKDRIPHFCSGCPHNTSTKLPEGSRGLAG
IGCHYMVTWMDRETKLFTHMGGEGVTWVGQAPFTDEKHVFANLGDGTYFHSGLLAVRASV
AAKVNITYKILYNDAVAMTGGQEFDGPLDPAMISRQLAAENVRPIIVVTDEPDKYPVGTQ
WAEGVTIRHRSELDAVQRELREQPGVSAMIYDQTCASEKRRRRKRNAYPDPAKRAVINEA
VCEGCGDCSVQSNCLSVEPLETEFGRKRQINQSSCNKDYSCVNGFCPSFVTVEGGQLKKP
ARAQADVGPALPSLPEPVLPGLAQPYGILVTGVGGTGVITIGQIIAMAAHVEGRACSVLD
MSGLAQKGGPVMSHVRVAEDAAHIHSTRVGTGMADLVIGCDVIVTASRDALSRMGEGRTH
AAVNSTQMPTAAFVRNPDWQFPTASSEGEIARACGRDNLSLVDAGRIATALMGDAIATNM
FMLGYAWQKGWVPLSEAALLRAIELNALQVEFNKQAFAWGRAAAHDVAFVLAAAGRNGMS
AQVIEFKRTPTLDELVERRVAFLTDYLNAAYARSYRDFVEQVRARESALGEAGRGLKLSR
AVASYLFKLMAYKDEYEVARLHADPAFRAKIAGMFEGDYKLRFHLAPPLLAKRDDKGHLR
KQAFGSWMMPVFGVLARLRFLRGTALDPFAYTEERRQERALITEYRATLSRLLDRLTPEN
LEQITAVARIPEEIRGYGHVKERHLKAAMEKQAALLAQLGQAAAQTQPQSPPGGGQQAA

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.