Comparing HSERO_RS22465 FitnessBrowser__HerbieS:HSERO_RS22465 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
P04983 Ribose import ATP-binding protein RbsA; EC 7.5.2.7 from Escherichia coli (strain K12) (see paper)
44% identity, 97% coverage: 3:506/518 of query aligns to 2:494/501 of P04983
4u00A Crystal structure of ttha1159 in complex with adp (see paper)
30% identity, 42% coverage: 5:224/518 of query aligns to 2:214/241 of 4u00A
3c4jA Abc protein artp in complex with atp-gamma-s
32% identity, 42% coverage: 5:224/518 of query aligns to 3:216/242 of 3c4jA
3c41J Abc protein artp in complex with amp-pnp/mg2+
32% identity, 42% coverage: 5:224/518 of query aligns to 3:216/242 of 3c41J
2olkA Abc protein artp in complex with adp-beta-s
32% identity, 42% coverage: 5:224/518 of query aligns to 3:216/242 of 2olkA
2oljA Abc protein artp in complex with adp/mg2+
32% identity, 42% coverage: 5:224/518 of query aligns to 3:216/242 of 2oljA
1oxvD Crystal structure of glcv, the abc-atpase of the glucose abc transporter from sulfolobus solfataricus (see paper)
32% identity, 42% coverage: 8:222/518 of query aligns to 6:218/353 of 1oxvD
1oxvA Crystal structure of glcv, the abc-atpase of the glucose abc transporter from sulfolobus solfataricus (see paper)
32% identity, 42% coverage: 8:222/518 of query aligns to 6:218/353 of 1oxvA
1oxuA Crystal structure of glcv, the abc-atpase of the glucose abc transporter from sulfolobus solfataricus (see paper)
32% identity, 42% coverage: 8:222/518 of query aligns to 6:218/353 of 1oxuA
Q97UY8 Glucose import ATP-binding protein GlcV; EC 7.5.2.- from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (Sulfolobus solfataricus) (see paper)
32% identity, 42% coverage: 8:222/518 of query aligns to 6:218/353 of Q97UY8
P30750 Methionine import ATP-binding protein MetN; EC 7.4.2.11 from Escherichia coli (strain K12) (see 3 papers)
29% identity, 49% coverage: 5:256/518 of query aligns to 1:259/343 of P30750
Sites not aligning to the query:
6cvlD Crystal structure of the escherichia coli atpgs-bound metni methionine abc transporter in complex with its metq binding protein (see paper)
28% identity, 49% coverage: 4:256/518 of query aligns to 1:260/344 of 6cvlD
3tuzC Inward facing conformations of the metni methionine abc transporter: cy5 semet soak crystal form (see paper)
28% identity, 49% coverage: 4:256/518 of query aligns to 1:260/344 of 3tuzC
Sites not aligning to the query:
3tuiC Inward facing conformations of the metni methionine abc transporter: cy5 native crystal form (see paper)
28% identity, 49% coverage: 4:256/518 of query aligns to 1:260/344 of 3tuiC
1g6hA Crystal structure of the adp conformation of mj1267, an atp-binding cassette of an abc transporter (see paper)
28% identity, 43% coverage: 5:225/518 of query aligns to 4:230/254 of 1g6hA
1g9xB Characterization of the twinning structure of mj1267, an atp-binding cassette of an abc transporter (see paper)
29% identity, 43% coverage: 5:225/518 of query aligns to 4:230/253 of 1g9xB
4ymuJ Crystal structure of an amino acid abc transporter complex with arginines and atps (see paper)
27% identity, 41% coverage: 11:221/518 of query aligns to 7:212/240 of 4ymuJ
6b8bA E. Coli lptb in complex with adp and a novobiocin derivative (see paper)
30% identity, 43% coverage: 6:230/518 of query aligns to 3:222/233 of 6b8bA
6b89A E. Coli lptb in complex with adp and novobiocin (see paper)
30% identity, 43% coverage: 6:230/518 of query aligns to 3:222/234 of 6b89A
4p31A Crystal structure of a selenomethionine derivative of e. Coli lptb in complex with adp-magensium (see paper)
30% identity, 43% coverage: 6:230/518 of query aligns to 3:222/234 of 4p31A
>HSERO_RS22465 FitnessBrowser__HerbieS:HSERO_RS22465
MSEYLLEMKGIVKSFGGVRALNGIDIKIRPGECVGLCGENGAGKSTLMKILSGVYPHGTW
EGEILWDGKPLQAHSVRDTEAAGIVIIHQELMLVPELSVAENIFMGHEITLPGGRMNYPA
MYRRAEELMRELNMPDINVALPVSQYGGGHQQLVEIAKALNKDARLLILDEPSSSLTASE
IGVLLKIIKDLKARGVACVYISHKLDEVAEVCDTISVIRDGKHIATTPMQEMDVDKIITQ
MVGREITAMYPERNHAIGEVVLEARNITCYDIDNPRRKRVDDVSFSVRRGEILGIAGLVG
AGRTELVSAIFGAYRGRYEGQVLLEGKPADTSSPLKSIRRGLCMVPEDRKHHGIVPDLDV
GQNITLTVLNRFSRGSRIDGSAELKTIQDEIGRMRVKTATPFLPITSLSGGNQQKAVLAK
MLLAQPKVLILDEPTRGVDVGAKAEIYRLISELAKAGLAIIMVSSELAEVLGVSDRVLVI
GEGRLRGDFVNDNLSQETVLAAAINQPVPQATPRAAAG
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory