Comparing HSERO_RS23930 FitnessBrowser__HerbieS:HSERO_RS23930 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
6r5nA The crystal structure of glycoside hydrolase bglx from p. Aeruginosa in complex with 1-deoxynojirimycin (see paper)
61% identity, 94% coverage: 49:783/784 of query aligns to 2:732/733 of 6r5nA
6r5iA The crystal structure of the glycoside hydrolase bglx from p. Aeruginosa (see paper)
61% identity, 94% coverage: 49:783/784 of query aligns to 2:732/733 of 6r5iA
6r5tA The crystal structure of glycoside hydrolase bglx inactive mutant d286n from p. Aeruginosa in complex with lactose (see paper)
61% identity, 94% coverage: 49:783/784 of query aligns to 2:732/733 of 6r5tA
6r5vA The crystal structure of glycoside hydrolase bglx inactive mutant d286n from p. Aeruginosa in complex with xylotriose (see paper)
61% identity, 94% coverage: 49:783/784 of query aligns to 2:729/730 of 6r5vA
6r5oA The crystal structure the glycoside hydrolase bglx inactive mutant d286n from p. Aeruginosa in complex with two glucose molecules (see paper)
61% identity, 94% coverage: 49:783/784 of query aligns to 2:729/730 of 6r5oA
3u48B From soil to structure: a novel dimeric family 3-beta-glucosidase isolated from compost using metagenomic analysis
49% identity, 93% coverage: 53:782/784 of query aligns to 5:733/742 of 3u48B
5tf0A Crystal structure of glycosil hydrolase family 3 n-terminal domain protein from bacteroides intestinalis
48% identity, 94% coverage: 49:783/784 of query aligns to 2:733/733 of 5tf0A
5xxmA Crystal structure of gh3 beta-glucosidase from bacteroides thetaiotaomicron in complex with gluconolactone (see paper)
46% identity, 94% coverage: 49:784/784 of query aligns to 4:747/749 of 5xxmA
5xxnA Crystal structure of mutant (d286n) beta-glucosidase from bacteroides thetaiotaomicron in complex with sophorose (see paper)
46% identity, 94% coverage: 49:784/784 of query aligns to 1:736/744 of 5xxnA
4zoaA Crystal structure of beta-glucosidase from listeria innocua in complex with isofagomine (see paper)
44% identity, 92% coverage: 54:776/784 of query aligns to 6:704/716 of 4zoaA
4zobA Crystal structure of beta-glucosidase from listeria innocua in complex with gluconolactone (see paper)
43% identity, 92% coverage: 54:776/784 of query aligns to 6:710/722 of 4zobA
4zo7A Crystal structure of mutant (d270a) beta-glucosidase from listeria innocua in complex with gentiobiose (see paper)
43% identity, 92% coverage: 54:776/784 of query aligns to 6:712/724 of 4zo7A
4zo6B Crystal structure of mutant (d270a) beta-glucosidase from listeria innocua in complex with cellobiose (see paper)
43% identity, 92% coverage: 54:776/784 of query aligns to 6:712/724 of 4zo6B
7zgzX Crystal structure of beta-xylosidase from thermotoga maritima in complex with methyl-beta-d-xylopyranoside hydrolysed to xylose
37% identity, 93% coverage: 54:783/784 of query aligns to 15:730/753 of 7zgzX
7zdyW Crystal structure of beta-xylosidase from thermotoga maritima in complex with methyl-beta-d-xylopyranoside
37% identity, 93% coverage: 54:783/784 of query aligns to 15:741/763 of 7zdyW
7zb3A Crystal structure of beta-xylosidase from thermotoga maritima in complex with xylohexaose hydrolysed to xylobiose
36% identity, 93% coverage: 54:783/784 of query aligns to 15:741/765 of 7zb3A
8c7fA Crystal structure of beta-xylosidase mutant (d281n, e517q) from thermotoga maritima in complex with xylopentaose
36% identity, 93% coverage: 54:783/784 of query aligns to 15:750/772 of 8c7fA
5z87A Structural of a novel b-glucosidase emgh1 at 2.3 angstrom from erythrobacter marinus
38% identity, 86% coverage: 109:783/784 of query aligns to 84:755/756 of 5z87A
5z9sA Functional and structural characterization of a beta-glucosidase involved in saponin metabolism from intestinal bacteria (see paper)
34% identity, 93% coverage: 54:783/784 of query aligns to 5:764/765 of 5z9sA
5yqsA Isoprimeverose-producing enzyme from aspergillus oryzae in complex with isoprimeverose (see paper)
32% identity, 93% coverage: 54:784/784 of query aligns to 15:754/754 of 5yqsA
>HSERO_RS23930 FitnessBrowser__HerbieS:HSERO_RS23930
VSHKLTKRQAAPTRRPRLALAVTLCALACSAVLTGPTAHAQANPALLGDKTAFIDDLLRQ
MTLEEKIGQLRLISIGPEMPAKKLAEELAAGRVGGTFNSVTRPENRPLQDGAMRSRLKIP
MFFAYDVIHGHRTTFPIGLGLASSWDMDVVARAMRVSAEEAAADSIDMTFAPMVDISRDP
RWGRTSEGFGEDPYLVSRIAEVSVRALQGDTKPIAANRVMASVKHFALYGAVEGGRDYNV
VNMDPQRMYNDYLPPYRAAIDAGAGAVMVALNSINGAPATSNTWLLQDLLRRDWGFKGLT
VSDHGAITELVNHGVAQNDSEAARLSMKAGTDMSMADQVYIKQLPELVRSGKVSQQELDN
AVRDILGAKYDLGLFKDPYVRIGRAADDPPDVYADSRLHRRDAREVAQQSMVLLENRNAA
LPLKKNARIALVGPLADSHIDMLGSWSAAGKDKQTITLRQGLQAALGGQGKLVYARGANI
TEDKHIVDYLNFLNWDDPEVVQDKRSPKAMIDEAVKAARHADVIVAAVGESRGMSHESSS
RTSLSLPQSQLDLLKALKATGKPLVLVLMNGRPLDLNWARENASAILETWYTGTEGGNAI
ADILFGDVNPSGKLPITFPRSVGQIPSYYNHPRVGRPYTEGKPGNYTSQYFDEPNGPLYP
FGYGLSYTEFKLSEVSLSQPSMSADGKVEASVTVKNVGRRAGATVVQLYLRDVAASVVRP
VKELKDFRKVMLQPGEEKQVQFSIDRKALSFYNAKLEYVAEPGEFQVQIGLDSKEVKTAS
FNLQ
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory