SitesBLAST – Find functional sites

 

SitesBLAST

Comparing N515DRAFT_1223 FitnessBrowser__Dyella79:N515DRAFT_1223 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 1 hits to proteins with known functional sites (download)

7bywA Crystal structure of acidovorax avenae l-fucose mutarotase (l-fucose- bound form) (see paper)
31% identity, 88% coverage: 11:108/112 of query aligns to 11:107/108 of 7bywA

query
sites
7bywA
P
 
P
Q
 
E
S
 
H
I
 
I
A
 
D
E
 
E
Y
|
Y
E
 
K
R
 
R
W
 
L
H
|
H
R
 
-
P
 
-
G
 
A
Q
 
A
I
 
V
W
 
W
P
 
P
E
 
A
I
 
V
V
 
L
A
 
A
S
 
R
I
 
L
R
 
A
E
 
E
A
 
A
G
 
H
V
 
V
L
 
R
D
 
N
L
x
Y
E
 
S
I
 
I
F
 
F
-
 
L
R
 
R
T
 
E
R
 
P
N
 
E
R
 
N
L
 
L
V
 
L
L
 
F
A
 
G
M
 
Y
D
 
W
V
 
E
T
 
Y
D
 
H
D
 
G
F
 
T
D
 
D
G
 
Y
A
 
A
A
 
A
K
 
D
A
 
M
A
 
E
A
 
A
D
 
I
A
 
A
A
 
Q
N
 
D
P
 
P
R
 
E
V
 
T
Q
 
R
A
 
R
W
|
W
E
x
W
S
 
T
L
 
F
M
 
C
D
 
G
T
 
P
F
 
C
Q
 
Q
Q
 
E
R
 
P
L
 
L
P
 
A
W
 
S
A
 
R
K
 
Q
P
 
P
G
 
G
Q
 
E
K
 
H
W
 
W
V
 
A
P
 
H
M
 
M
E
 
E
R
 
E
I
 
V
F
 
F
S
 
H
L
 
V

Query Sequence

>N515DRAFT_1223 FitnessBrowser__Dyella79:N515DRAFT_1223
MYFALDLHDDPQSIAEYERWHRPGQIWPEIVASIREAGVLDLEIFRTRNRLVLAMDVTDD
FDGAAKAAADAANPRVQAWESLMDTFQQRLPWAKPGQKWVPMERIFSLRECP

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory