Comparing N515DRAFT_2409 FitnessBrowser__Dyella79:N515DRAFT_2409 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 12 hits to proteins with known functional sites (download)
8epzA Crystal structure of fe-s cluster-dependent dehydratase from paralcaligenes ureilyticus in complex with mn
74% identity, 99% coverage: 7:574/574 of query aligns to 1:569/569 of 8epzA
8ej0A Crystal structure of fe-s cluster-dependent dehydratase from paralcaligenes ureilyticus in complex with mg
74% identity, 99% coverage: 8:574/574 of query aligns to 1:568/568 of 8ej0A
B5ZZ34 L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum bv. trifolii (strain WSM2304) (see 2 papers)
65% identity, 98% coverage: 10:574/574 of query aligns to 12:579/579 of B5ZZ34
5j85A Ser480ala mutant of l-arabinonate dehydratase (see paper)
65% identity, 98% coverage: 10:574/574 of query aligns to 9:576/576 of 5j85A
Q1JUQ1 L-arabonate dehydratase; L-arabinonate dehydratase; EC 4.2.1.25 from Azospirillum brasilense (see paper)
66% identity, 100% coverage: 3:574/574 of query aligns to 2:583/583 of Q1JUQ1
7m3kA Crystal structure of galactonate dehydratase from brucella melitensis biovar abortus 2308
46% identity, 96% coverage: 10:559/574 of query aligns to 3:572/587 of 7m3kA
5oynA Crystal structure of d-xylonate dehydratase in holo-form (see paper)
42% identity, 97% coverage: 5:562/574 of query aligns to 2:575/589 of 5oynA
Q9A9Z2 D-xylonate dehydratase; XyDHT; Gluconate dehydratase; EC 4.2.1.82; EC 4.2.1.39 from Caulobacter vibrioides (strain ATCC 19089 / CB15) (Caulobacter crescentus) (see 2 papers)
42% identity, 98% coverage: 3:562/574 of query aligns to 6:581/595 of Q9A9Z2
6ovtA Crystal structure of ilvd from mycobacterium tuberculosis (see paper)
37% identity, 94% coverage: 18:556/574 of query aligns to 13:559/562 of 6ovtA
P9WKJ5 Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
37% identity, 94% coverage: 18:556/574 of query aligns to 26:572/575 of P9WKJ5
Q9LIR4 Dihydroxy-acid dehydratase, chloroplastic; AthDHAD; DAD; EC 4.2.1.9 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
35% identity, 93% coverage: 26:559/574 of query aligns to 70:607/608 of Q9LIR4
8hs0A The mutant structure of dhad v178w
35% identity, 93% coverage: 26:559/574 of query aligns to 32:569/570 of 8hs0A
>N515DRAFT_2409 FitnessBrowser__Dyella79:N515DRAFT_2409
MGSPKKPLRRSQEWFGREGKQGFYYRSWLKGLGLPNDMFDGRPVIGICNTWSELTPCNSS
FRELAEHVKRGVYEAGGFPLEFPVMSLGETQMRPTAMLFRNLASMDVEESIRANPIDGVV
LLMGCDKTTPALMMGAASVNLPTIGLSGGPSLSGNWRGQPIGSGTGVIRMSEMVRAGELA
QEEFVEAEACMQRSKGSCMTMGTASTMASMVEALGLSLPENAAIPAVDSRRFRLAHLSGR
RIVEMVHEDLRMSKILTRAAFENAIRANAAIGGSTNAVIHLLALAGRLGVELALDDWDRL
GSHLPCLVNLKPSGDYLMEDFYYAGGLPAVLREIAPHLHLGALTANGRTLGDNIATAPCW
NRDVIRPIEEPLKREAGIAVLRGNLAPDGAVIKPSAASAHLLQHRGRAVVFENIDDFKAR
IDDEALDIDETCVMVLKNCGPRGYPGMAEVGNMPLPPKLLRRGITDIVRISDARMSGTAY
GTVVLHASPEAAAGGNLALVRDGDFIELDVPGRRLHLDLADDELARRRAAWKAPPPPERG
WAKLYVDHVQQAHLGADLDILVGGSGSDVAGDSH
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory