Comparing N515DRAFT_2779 FitnessBrowser__Dyella79:N515DRAFT_2779 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 8 hits to proteins with known functional sites (download)
P48636 Cytokinin riboside 5'-monophosphate phosphoribohydrolase; AMP nucleosidase; PaLOG; EC 3.2.2.n1; EC 3.2.2.4 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
56% identity, 95% coverage: 6:194/198 of query aligns to 5:193/195 of P48636
5zbkA Crystal structure of type-i log from pseudomonas aeruginosa pao1 in complex with amp (see paper)
58% identity, 86% coverage: 6:176/198 of query aligns to 4:174/182 of 5zbkA
Q5ZC82 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG; Protein LONELY GUY; EC 3.2.2.n1 from Oryza sativa subsp. japonica (Rice) (see paper)
44% identity, 91% coverage: 7:186/198 of query aligns to 38:217/242 of Q5ZC82
5zblD Crystal structure of type-i log from corynebacterium glutamicum in complex with amp (see paper)
49% identity, 77% coverage: 7:159/198 of query aligns to 5:156/181 of 5zblD
O05306 Cytokinin riboside 5'-monophosphate phosphoribohydrolase; Protein LONELY GUY homolog; LOG homolog; EC 3.2.2.n1 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
46% identity, 77% coverage: 7:158/198 of query aligns to 13:163/187 of O05306
7w2iA Crystal structure of log (rv1205) from mycobacterium tuberculosis (see paper)
46% identity, 77% coverage: 7:158/198 of query aligns to 9:159/183 of 7w2iA
5ajuA Crystal structure of ligand-free phosphoribohydroxylase lonely guy from claviceps purpurea in complex with phosphoribose (see paper)
37% identity, 89% coverage: 7:183/198 of query aligns to 5:204/217 of 5ajuA
3sbxA Crystal structure of a putative uncharacterized protein from mycobacterium marinum bound to adenosine 5'-monophosphate amp (see paper)
41% identity, 85% coverage: 7:174/198 of query aligns to 4:170/177 of 3sbxA
>N515DRAFT_2779 FitnessBrowser__Dyella79:N515DRAFT_2779
MPQPTAICVYCGSSPGGSPEYTEQARAFGAEMARRGIALVYGGGKVGLMGTVADAVLAGG
GKVIGVIPRQLVEREVAHVGLTELEVVETMHQRKTRMFERSDAFVALPGGFGTMDEMFEM
LTWAQLGLHSFPCAFLDVRGYYRQLRGMLDHMVDERFVRTEQRDSVWFGDSMEKLFHWME
HYQGQYSPKWIDRSSVEA
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory