Comparing N515DRAFT_2931 FitnessBrowser__Dyella79:N515DRAFT_2931 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 4 hits to proteins with known functional sites (download)
6j2lA Crystal structure of bi-functional enzyme (see paper)
56% identity, 93% coverage: 11:205/209 of query aligns to 9:200/200 of 6j2lA
6j2lB Crystal structure of bi-functional enzyme (see paper)
55% identity, 83% coverage: 11:183/209 of query aligns to 8:163/185 of 6j2lB
7bgnA Crystal structure of mthisn2-amp complex, a bifunctional enzyme from the histidine biosynthetic pathway (see paper)
36% identity, 94% coverage: 9:205/209 of query aligns to 4:203/204 of 7bgnA
Sites not aligning to the query:
7bgmA Crystal structure of mthisn2, a bifunctional enzyme from the histidine biosynthetic pathway (see paper)
35% identity, 94% coverage: 9:205/209 of query aligns to 6:212/213 of 7bgmA
>N515DRAFT_2931 FitnessBrowser__Dyella79:N515DRAFT_2931
MSDLNTDFSRLDWSKGDGLLPAIVQHWLTGEVLMLGYMNAEALAHSLSSAQVTFFSRSKQ
RLWTKGESSGHVLALKSARIDCDGDTLLLQAEPQGPTCHLGTSSCFGERADVAPPLGFLA
TLDRLVEQRAAERPAGSYTTRLFEDGIRRIAQKVGEEGVETALAAVVQDDEALLGEAADL
VFHLMVALRARGLSTSDVCRVLEARHQSS
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory