Comparing N515DRAFT_2938 FitnessBrowser__Dyella79:N515DRAFT_2938 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
4yb7A Adenosine triphosphate phosphoribosyltransferase from campylobacter jejuni in complex with atp (see paper)
44% identity, 98% coverage: 6:296/297 of query aligns to 3:295/296 of 4yb7A
4yb6A Adenosine triphosphate phosphoribosyltransferase from campylobacter jejuni in complex with the inhibitors amp and histidine (see paper)
44% identity, 98% coverage: 6:296/297 of query aligns to 3:295/296 of 4yb6A
4yb6E Adenosine triphosphate phosphoribosyltransferase from campylobacter jejuni in complex with the inhibitors amp and histidine (see paper)
44% identity, 98% coverage: 6:296/297 of query aligns to 3:292/293 of 4yb6E
4yb7C Adenosine triphosphate phosphoribosyltransferase from campylobacter jejuni in complex with atp (see paper)
43% identity, 98% coverage: 6:296/297 of query aligns to 3:293/294 of 4yb7C
1q1kA Structure of atp-phosphoribosyltransferase from e. Coli complexed with pr-atp (see paper)
44% identity, 98% coverage: 6:296/297 of query aligns to 2:287/288 of 1q1kA
1h3dA Structure of the e.Coli atp-phosphoribosyltransferase (see paper)
44% identity, 98% coverage: 6:296/297 of query aligns to 2:287/288 of 1h3dA
7dahC Adenosine triphosphate phosphoribosyltransferase from vibrio cholerae in complex with atp and prpp
43% identity, 98% coverage: 6:296/297 of query aligns to 3:287/288 of 7dahC
5ubgA Catalytic core domain of adenosine triphosphate phosphoribosyltransferase from campylobacter jejuni with bound phosphoribosyl-atp (see paper)
46% identity, 73% coverage: 6:223/297 of query aligns to 3:222/222 of 5ubgA
5ub9A Catalytic core domain of adenosine triphosphate phosphoribosyltransferase from campylobacter jejuni (see paper)
46% identity, 73% coverage: 6:223/297 of query aligns to 2:220/220 of 5ub9A
5ubiA Catalytic core domain of adenosine triphosphate phosphoribosyltransferase from campylobacter jejuni with bound prpp (see paper)
46% identity, 72% coverage: 6:219/297 of query aligns to 3:218/218 of 5ubiA
2vd3A The structure of histidine inhibited hisg from methanobacterium thermoautotrophicum
34% identity, 98% coverage: 6:296/297 of query aligns to 4:288/289 of 2vd3A
1nh8A Atp phosphoribosyltransferase (atp-prtase) from mycobacterium tuberculosis in complex with amp and histidine (see paper)
32% identity, 95% coverage: 7:288/297 of query aligns to 2:267/276 of 1nh8A
5lhtA Atp phosphoribosyltransferase from mycobacterium tuberculosis in complex with the allosteric activator 3-(2-thienyl)-l-alanine (see paper)
31% identity, 95% coverage: 7:288/297 of query aligns to 2:275/284 of 5lhtA
5u99A Transition state analysis of adenosine triphosphate phosphoribosyltransferase (see paper)
32% identity, 95% coverage: 7:288/297 of query aligns to 4:269/278 of 5u99A
6czmE Crystal structure of medicago truncatula atp-phosphoribosyltransferase in tense form (see paper)
32% identity, 72% coverage: 4:217/297 of query aligns to 7:236/342 of 6czmE
Sites not aligning to the query:
6fd9A Catalytic subunit hisg from psychrobacter arcticus atp phosphoribosyltransferase (hiszg atpprt) in complex with amp
33% identity, 60% coverage: 7:184/297 of query aligns to 4:173/209 of 6fd9A
6fcwA Catalytic subunit hisg from psychrobacter arcticus atp phosphoribosyltransferase (hiszg atpprt) in complex with pratp
33% identity, 60% coverage: 7:184/297 of query aligns to 4:173/209 of 6fcwA
6fctA Catalytic subunit hisg from psychrobacter arcticus atp phosphoribosyltransferase (hiszg atpprt) in complex with prpp and atp
33% identity, 60% coverage: 7:184/297 of query aligns to 4:173/209 of 6fctA
6fcaA Catalytic subunit hisg from psychrobacter arcticus atp phosphoribosyltransferase (hiszg atpprt) in complex with prpp
33% identity, 60% coverage: 7:184/297 of query aligns to 4:173/209 of 6fcaA
6fcyA Catalytic subunit hisg from psychrobacter arcticus atp phosphoribosyltransferase (hiszg atpprt) in complex with prpp and adp
33% identity, 60% coverage: 7:184/297 of query aligns to 4:173/208 of 6fcyA
>N515DRAFT_2938 FitnessBrowser__Dyella79:N515DRAFT_2938
MKPRDRLRIAMQKSGRLTEPALDLLNRCGLTFRQSRDKLFLFGEGEPVDLLLVRDDDIPG
LIAQGVCDLGIVGRNVLSEYSFTDGREAGPLAEWRSLGFGRCRLSIAVPQEMNYEQPQQL
AGLRIATSYPGLLRDWLRNQGVDAGVVTLAGSVEIAPRLGTADLICDLVQSGGTLVANQL
READVLLESEAVLAGPRTLPTDERGDMIELLLKRLDGVMQVRESRLLLLQTSRQHLDAVT
RLLPGGPQPTLLPVAGQPDQLMLQALCAGEVSWRQLEEIKKAGAREMFVLPVEKMLA
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory