Comparing N515DRAFT_3773 FitnessBrowser__Dyella79:N515DRAFT_3773 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 5 hits to proteins with known functional sites (download)
7wxiA Gpr domain of drosophila p5cs filament with glutamate and atpgammas (see paper)
38% identity, 95% coverage: 12:409/420 of query aligns to 10:406/430 of 7wxiA
7wxgA Gpr domain closed form of drosophila p5cs filament with glutamate, atp, and NADPH (see paper)
38% identity, 95% coverage: 12:409/420 of query aligns to 10:406/430 of 7wxgA
4jbeB 1.95 angstrom crystal structure of gamma-glutamyl phosphate reductase from saccharomonospora viridis.
34% identity, 95% coverage: 8:407/420 of query aligns to 12:407/412 of 4jbeB
5j7iC Crystal structure of a geobacillus thermoglucosidasius acetylating aldehyde dehydrogenase in complex with adp (see paper)
21% identity, 94% coverage: 1:396/420 of query aligns to 11:425/455 of 5j7iC
5j7iB Crystal structure of a geobacillus thermoglucosidasius acetylating aldehyde dehydrogenase in complex with adp (see paper)
21% identity, 94% coverage: 1:396/420 of query aligns to 12:426/456 of 5j7iB
>N515DRAFT_3773 FitnessBrowser__Dyella79:N515DRAFT_3773
MSEMRTQALACRDAAQVLAELTTEAKRALLQALADALHAGTGVVLEANARDMAAAREKGV
QGAMLDRLRLDEARVAGIVAALREVAALPDPVGVVTRRETRPNGLEVERVRVPLGVIAMI
YEARPNVTADAAALCLMAGNGVILRGGSEAVHSNTAIAGVLRQALAAQGVPEAALTLVSD
LRRETMVELLQLSDIVDLAIPRGGEGLIRFVAEHARVPVIKHYKGVCHLYVDRAADQALA
LDLLVDGKTSRPGVCNALETLLVHRDIAAEFLPRAADALGRRKVELRGCERSRALVPAMK
PADETDYAAEYLDLILAVRIVDDLEAALAHIHRYSSDHTEVIATRDEDAARRFVRGIRSA
VVMVNASSRFSDGGELGLGAEIGISTTRLHAYGPMGAEALTVERFVVRGDGQVRHPESRT
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory