Comparing NP_347529.1 NCBI__GCF_000008765.1:NP_347529.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 8 hits to proteins with known functional sites (download)
3ggoA Crystal structure of prephenate dehydrogenase from a. Aeolicus with hpp and nadh (see paper)
33% identity, 96% coverage: 9:282/286 of query aligns to 7:282/285 of 3ggoA
3ggpA Crystal structure of prephenate dehydrogenase from a. Aeolicus in complex with hydroxyphenyl propionate and NAD+ (see paper)
33% identity, 96% coverage: 9:282/286 of query aligns to 7:282/286 of 3ggpA
3gggD The crystal structure of a. Aeolicus prephenate dehydrogenase in complex with tyrosine and NAD+ (see paper)
33% identity, 96% coverage: 9:282/286 of query aligns to 15:290/293 of 3gggD
3b1fA Crystal structure of prephenate dehydrogenase from streptococcus mutans (see paper)
31% identity, 93% coverage: 9:275/286 of query aligns to 8:275/286 of 3b1fA
5uyyA Crystal structure of prephenate dehydrogenase tyra from bacillus anthracis in complex with l-tyrosine (see paper)
26% identity, 97% coverage: 1:278/286 of query aligns to 3:283/373 of 5uyyA
Sites not aligning to the query:
6u60B Crystal structure of prephenate dehydrogenase tyra from bacillus anthracis in complex with NAD and l-tyrosine (see paper)
26% identity, 96% coverage: 10:283/286 of query aligns to 4:280/365 of 6u60B
Sites not aligning to the query:
4wjiA Crystal structure of cyclohexadienyl dehydrogenase from sinorhizobium meliloti in complex with NADP and tyrosine
29% identity, 90% coverage: 9:264/286 of query aligns to 6:265/293 of 4wjiA
2f1kA Crystal structure of synechocystis arogenate dehydrogenase (see paper)
27% identity, 94% coverage: 8:276/286 of query aligns to 1:268/279 of 2f1kA
>NP_347529.1 NCBI__GCF_000008765.1:NP_347529.1
MEDGEFNINLTIVGLGLMGGSYAMALKEKNKGHIWGVDLDNNTLKNAAEMDIIDEGYSIE
NAYIPLKKSDIVIIAIYPEALVQFVKNNVNNFKKGAIITDVLGIKEDNISYIQSILGDSA
EFLGGHPMAGKEVSGFSNASKNIFNNANYILTPTVKNKKDTIEFMKKFIRSIGCTSITEV
TPEKHDEIIAFTSQLPHVIAVSLMNTKSADDIKHFVGGSFRDATRVAMINPDLWCQLFMR
NKKNIIDSIEEFQKSLNQIKGFIKEENVNDIKQFLKDAASKKEGTV
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory