Comparing NP_347533.1 NCBI__GCF_000008765.1:NP_347533.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
O67049 Shikimate dehydrogenase (NADP(+)); SD; SDH; EC 1.1.1.25 from Aquifex aeolicus (strain VF5) (see paper)
36% identity, 69% coverage: 95:349/367 of query aligns to 3:255/269 of O67049
2hk9B Crystal structure of shikimate dehydrogenase from aquifex aeolicus in complex with shikimate and NADP+ at 2.2 angstrom resolution (see paper)
36% identity, 69% coverage: 95:349/367 of query aligns to 3:255/267 of 2hk9B
2hk9A Crystal structure of shikimate dehydrogenase from aquifex aeolicus in complex with shikimate and NADP+ at 2.2 angstrom resolution (see paper)
36% identity, 69% coverage: 95:349/367 of query aligns to 3:255/269 of 2hk9A
Q58484 Shikimate dehydrogenase (NADP(+)); SDH; EC 1.1.1.25 from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii) (see paper)
37% identity, 68% coverage: 98:347/367 of query aligns to 6:265/282 of Q58484
1nvtB Crystal structure of shikimate dehydrogenase (aroe or mj1084) in complex with NADP+ (see paper)
37% identity, 68% coverage: 98:347/367 of query aligns to 11:270/287 of 1nvtB
1nvtA Crystal structure of shikimate dehydrogenase (aroe or mj1084) in complex with NADP+ (see paper)
37% identity, 68% coverage: 98:347/367 of query aligns to 11:270/287 of 1nvtA
3pgjA 2.49 angstrom resolution crystal structure of shikimate 5- dehydrogenase (aroe) from vibrio cholerae o1 biovar eltor str. N16961 in complex with shikimate
35% identity, 67% coverage: 101:347/367 of query aligns to 4:255/272 of 3pgjA
Q9KVT3 Shikimate dehydrogenase (NADP(+)); SDH; EC 1.1.1.25 from Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
35% identity, 67% coverage: 101:347/367 of query aligns to 8:259/278 of Q9KVT3
3tozA 2.2 angstrom crystal structure of shikimate 5-dehydrogenase from listeria monocytogenes in complex with NAD.
31% identity, 74% coverage: 92:361/367 of query aligns to 7:290/291 of 3tozA
Q8Y9N5 Shikimate dehydrogenase (NADP(+)); SDH; EC 1.1.1.25 from Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
31% identity, 74% coverage: 92:361/367 of query aligns to 7:290/291 of Q8Y9N5
3tnlA 1.45 angstrom crystal structure of shikimate 5-dehydrogenase from listeria monocytogenes in complex with shikimate and NAD.
31% identity, 74% coverage: 92:361/367 of query aligns to 4:287/288 of 3tnlA
3sefA 2.4 angstrom resolution crystal structure of shikimate 5-dehydrogenase (aroe) from vibrio cholerae o1 biovar eltor str. N16961 in complex with shikimate and NADPH
35% identity, 65% coverage: 111:347/367 of query aligns to 11:251/268 of 3sefA
2cy0A Crystal structure of shikimate 5-dehydrogenase (aroe) from thermus thermophilus hb8 in complex with NADP (see paper)
31% identity, 70% coverage: 101:356/367 of query aligns to 4:255/262 of 2cy0A
2ev9B Crystal structure of shikimate 5-dehydrogenase (aroe) from thermus thermophilus hb8 in complex with NADP(h) and shikimate (see paper)
31% identity, 70% coverage: 101:356/367 of query aligns to 4:255/263 of 2ev9B
Q5SJF8 Shikimate dehydrogenase (NADP(+)); SDH; EC 1.1.1.25 from Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) (see paper)
31% identity, 70% coverage: 101:356/367 of query aligns to 4:255/263 of Q5SJF8
Q5HNV1 Shikimate dehydrogenase (NADP(+)); SDH; EC 1.1.1.25 from Staphylococcus epidermidis (strain ATCC 35984 / RP62A) (see paper)
30% identity, 68% coverage: 101:350/367 of query aligns to 3:253/269 of Q5HNV1
3sefC 2.4 angstrom resolution crystal structure of shikimate 5-dehydrogenase (aroe) from vibrio cholerae o1 biovar eltor str. N16961 in complex with shikimate and NADPH
32% identity, 67% coverage: 101:347/367 of query aligns to 4:228/244 of 3sefC
P15770 Shikimate dehydrogenase (NADP(+)); SD; SDH; EC 1.1.1.25 from Escherichia coli (strain K12) (see paper)
29% identity, 73% coverage: 101:367/367 of query aligns to 4:272/272 of P15770
1nytA Shikimate dehydrogenase aroe complexed with NADP+ (see paper)
29% identity, 72% coverage: 101:366/367 of query aligns to 4:271/271 of 1nytA
3dooA Crystal structure of shikimate dehydrogenase from staphylococcus epidermidis complexed with shikimate (see paper)
29% identity, 68% coverage: 101:350/367 of query aligns to 3:244/258 of 3dooA
>NP_347533.1 NCBI__GCF_000008765.1:NP_347533.1
MKELEEIRKEIDEVDKIITELFEKRMNLVMEVAEYKEKNSIPVSDSKREKKVIDKNIGYL
KNKEYSEVLKEFYINFMNLSKKLERKRIYNEEKTSVNTSIYGLIGEKLGHSHSSYIHKLI
FEKVGIKGIYNLFEVPKEKLKESVDTFKIIKCGGLNVTIPYKVEVMKELYEISEKARKIG
AVNTLKFSREGISGFNTDYIGFGKMLSKFRVEIKNNICVVLGSGGAARAVLQYLKDNFAK
DIYVVTRNPEKTSEIYGEFKVISYDELSNLKGDVIINCTPKGMYPKEGESPVDKEVVAKF
SSAVDLIYNPVETLFLKYARESGVKAVNGLYMLVSQAAASEEIWNDISIDEIIVDEIFEV
LEEKIKS
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Lawrence Berkeley National Laboratory