SitesBLAST
Comparing NP_349562.1 NCBI__GCF_000008765.1:NP_349562.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
2c20A Crystal structure of udp-glucose 4-epimerase
61% identity, 99% coverage: 2:328/329 of query aligns to 2:328/329 of 2c20A
- active site: T117 (= T117), A118 (= A118), A119 (= A119), Y141 (= Y141), K145 (= K145), H184 (= H184)
- binding nicotinamide-adenine-dinucleotide: G7 (= G7), G10 (= G10), Y11 (= Y11), I12 (= I12), D31 (= D31), N32 (= N32), Q34 (= Q34), T35 (≠ S35), G36 (= G36), D51 (= D51), L52 (≠ I52), F73 (= F73), A74 (= A74), A75 (= A75), N92 (= N92), Y141 (= Y141), K145 (= K145), Y168 (= Y168), F169 (= F169), V171 (= V171), H184 (= H184)
- binding zinc ion: E182 (= E182), H184 (= H184), E187 (= E187), H189 (= H189)
2cnbA Trypanosoma brucei udp-galactose-4-epimerase in ternary complex with NAD and the substrate analogue udp-4-deoxy-4-fluoro-alpha-d-galactose (see paper)
44% identity, 99% coverage: 1:327/329 of query aligns to 3:365/366 of 2cnbA
- active site: S144 (≠ T117), A145 (= A118), A146 (= A119), Y169 (= Y141), K173 (= K145)
- binding nicotinamide-adenine-dinucleotide: G9 (= G7), G12 (= G10), Y13 (= Y11), I14 (= I12), D34 (= D31), S35 (≠ N32), V37 (vs. gap), G38 (vs. gap), D77 (= D51), V78 (≠ I52), M100 (≠ F73), C101 (≠ A74), A102 (= A75), L104 (≠ S77), N119 (= N92), S143 (= S116), S144 (≠ T117), Y169 (= Y141), K173 (= K145), Y196 (= Y168), F197 (= F169), A199 (≠ V171)
- binding uridine-5'-diphosphate-4-deoxy-4-fluoro-alpha-d-galactose: L104 (≠ S77), S144 (≠ T117), Y169 (= Y141), F197 (= F169), N198 (= N170), H217 (= H189), L218 (= L190), P238 (≠ T206), I239 (≠ V207), F240 (= F208), C251 (= C219), R253 (= R221), V297 (= V259), R320 (= R282), D323 (= D285)
1gy8C Trypanosoma brucei udp-galactose 4' epimerase (see paper)
44% identity, 99% coverage: 1:327/329 of query aligns to 3:369/370 of 1gy8C
- active site: S144 (≠ T117), A145 (= A118), A146 (= A119), Y170 (= Y141), K174 (= K145)
- binding nicotinamide-adenine-dinucleotide: G9 (= G7), G12 (= G10), Y13 (= Y11), I14 (= I12), D34 (= D31), S35 (≠ N32), L36 (= L33), V37 (vs. gap), G38 (vs. gap), D77 (= D51), V78 (≠ I52), M100 (≠ F73), C101 (≠ A74), A102 (= A75), L104 (≠ S77), N119 (= N92), S142 (= S115), S143 (= S116), S144 (≠ T117), Y170 (= Y141), K174 (= K145), Y197 (= Y168), A200 (≠ V171)
- binding uridine-5'-diphosphate: N199 (= N170), H218 (= H189), L219 (= L190), I222 (≠ L193), M241 (≠ I205), P242 (≠ T206), I243 (≠ V207), F244 (= F208), C255 (= C219), R257 (= R221), R324 (= R282), D327 (= D285)
4twrA Structure of udp-glucose 4-epimerase from brucella abortus
45% identity, 96% coverage: 2:316/329 of query aligns to 3:316/325 of 4twrA
- active site: S117 (≠ T117), C118 (≠ A118), A119 (= A119), Y141 (= Y141), K145 (= K145), H184 (= H184), H189 (= H189)
- binding nicotinamide-adenine-dinucleotide: G8 (= G7), G11 (= G10), F12 (≠ Y11), I13 (= I12), D32 (= D31), N33 (= N32), L34 (= L33), S35 (≠ Q34), T36 (≠ S35), G37 (= G36), D51 (= D51), I52 (= I52), F73 (= F73), A74 (= A74), A75 (= A75), N92 (= N92), S115 (= S115), K145 (= K145), Y168 (= Y168), A171 (≠ V171), H184 (= H184)
- binding zinc ion: E182 (= E182), H184 (= H184), E187 (= E187), H189 (= H189)
8wovB Crystal structure of arabidopsis thaliana udp-glucose 4-epimerase 2 (atuge2) complexed with udp, g233a mutant (see paper)
45% identity, 99% coverage: 2:327/329 of query aligns to 4:341/341 of 8wovB
- binding nicotinamide-adenine-dinucleotide: G9 (= G7), G12 (= G10), Y13 (= Y11), I14 (= I12), D33 (= D31), N34 (= N32), D36 (vs. gap), N37 (vs. gap), S38 (vs. gap), D63 (= D51), L64 (≠ I52), F85 (= F73), A86 (= A74), G87 (≠ A75), K89 (≠ S77), N104 (= N92), S127 (= S115), S129 (≠ T117), Y153 (= Y141), K157 (= K145), Y181 (= Y168), P184 (≠ V171)
- binding uridine-5'-diphosphate: N183 (= N170), N203 (≠ H189), L204 (= L190), L219 (≠ I205), T220 (= T206), F222 (= F208), R235 (= R221), Y237 (= Y223), R297 (= R282), D300 (= D285)
Q564Q1 UDP-glucose 4-epimerase; Galactowaldenase; UDP-N-acetylgalactosamine 4-epimerase; UDP-GalNAc 4-epimerase; UDP-N-acetylglucosamine 4-epimerase; UDP-GlcNAc 4-epimerase; UDP-galactose 4-epimerase; EC 5.1.3.2; EC 5.1.3.7 from Caenorhabditis elegans (see paper)
43% identity, 100% coverage: 1:329/329 of query aligns to 1:349/349 of Q564Q1
- P314 (≠ S293) mutation to L: In pv18; at the restrictive temperature of 25 degrees Celsius, embryos have cell-cell adhesion defects and die before hatching. The few surviving animals are arrested at the L1 larval stage. At the permissive temperature of 16-20 degrees Celsius, causes a developmental delay. Distal tip cell migration is impaired due to a reduced localization of metalloprotease mig-17 to the gonad basement membrane. Vulva lumen is smaller at the L4 larval stage. Accumulation of UDP-galactose (Gal) and reduction in UDP-N-acetylgalactosamine (GalNAc) levels. Hypersensitivity to a galactose-rich diet characterized by a slow development often resulting in an arrest at the L1 larval stage. Up-regulation of ER stress response protein hsp-4; expression is suppressed in an xbp-1 RNAi-mediated knockdown animals. Reduced survival upon E.faecalis or S.aureus-mediated infection.
7k3pA The structure of the udp-glc/glcnac 4-epimerase from the human pathogen campylobacter jejuni
40% identity, 97% coverage: 3:321/329 of query aligns to 4:327/329 of 7k3pA
- binding nicotinamide-adenine-dinucleotide: G8 (= G7), G11 (= G10), Y12 (= Y11), I13 (= I12), D32 (= D31), N33 (= N32), S35 (≠ Q34), G37 (= G36), D57 (= D51), L58 (≠ I52), F79 (= F73), A80 (= A74), I83 (≠ S77), N98 (= N92), Y147 (= Y141), K151 (= K145), Y175 (= Y168), N177 (= N170), V178 (= V171)
7xpqA Crystal structure of udp-glc/glcnac 4-epimerase with NAD/udp-glcnac (see paper)
42% identity, 99% coverage: 2:327/329 of query aligns to 3:342/343 of 7xpqA
- binding nicotinamide-adenine-dinucleotide: G8 (= G7), G11 (= G10), Y12 (= Y11), I13 (= I12), D32 (= D31), N33 (= N32), N36 (≠ S35), D62 (= D51), L63 (≠ I52), F84 (= F73), A85 (= A74), G86 (≠ A75), K88 (≠ S77), N103 (= N92), S126 (= S115), S128 (≠ T117), Y152 (= Y141), K156 (= K145), Y180 (= Y168), P183 (≠ V171)
- binding uridine-diphosphate-n-acetylglucosamine: N182 (= N170), N202 (≠ H189), L203 (= L190), T219 (= T206), Y221 (≠ F208), R234 (= R221), Y236 (= Y223), V275 (= V259), R298 (= R282), D301 (= D285)
7xpoA Crystal structure of udp-glc/glcnac 4-epimerase with NAD/udp-glc (see paper)
42% identity, 99% coverage: 2:327/329 of query aligns to 3:342/344 of 7xpoA
- binding nicotinamide-adenine-dinucleotide: G8 (= G7), G11 (= G10), Y12 (= Y11), I13 (= I12), D32 (= D31), N33 (= N32), N36 (≠ S35), D62 (= D51), L63 (≠ I52), F84 (= F73), A85 (= A74), G86 (≠ A75), K88 (≠ S77), N103 (= N92), S126 (= S115), S128 (≠ T117), Y152 (= Y141), K156 (= K145), Y180 (= Y168), P183 (≠ V171)
- binding uridine-5'-diphosphate-glucose: S128 (≠ T117), A129 (= A118), F181 (= F169), N182 (= N170), N202 (≠ H189), L203 (= L190), T219 (= T206), V220 (= V207), Y221 (≠ F208), R234 (= R221), Y236 (= Y223), V275 (= V259), R298 (= R282), D301 (= D285)
4lisB Crystal structure of udp-galactose-4-epimerase from aspergillus nidulans (see paper)
43% identity, 99% coverage: 2:327/329 of query aligns to 3:355/363 of 4lisB
- active site: S126 (≠ T117), A127 (= A118), T128 (≠ A119), Y154 (= Y141), K158 (= K145)
- binding nicotinamide-adenine-dinucleotide: G11 (= G10), Y12 (= Y11), I13 (= I12), D32 (= D31), N33 (= N32), N36 (≠ S35), S37 (≠ G36), D59 (= D51), V60 (≠ I52), F82 (= F73), A84 (= A75), K86 (≠ S77), S126 (≠ T117), Y154 (= Y141), K158 (= K145), Y195 (= Y168), P198 (≠ V171)
- binding uridine-5'-diphosphate: N197 (= N170), N217 (≠ H189), L218 (= L190), L234 (≠ T206), V235 (= V207), F236 (= F208), R249 (= R221), V288 (= V259), R311 (= R282), D314 (= D285)
4lisA Crystal structure of udp-galactose-4-epimerase from aspergillus nidulans (see paper)
43% identity, 99% coverage: 2:327/329 of query aligns to 4:356/364 of 4lisA
- active site: S127 (≠ T117), A128 (= A118), T129 (≠ A119), Y155 (= Y141), K159 (= K145)
- binding nicotinamide-adenine-dinucleotide: G12 (= G10), Y13 (= Y11), I14 (= I12), D33 (= D31), N34 (= N32), N37 (≠ S35), S38 (≠ G36), D60 (= D51), V61 (≠ I52), F83 (= F73), A85 (= A75), K87 (≠ S77), S127 (≠ T117), Y155 (= Y141), K159 (= K145), Y196 (= Y168), P199 (≠ V171)
- binding uridine-5'-diphosphate-glucose: K87 (≠ S77), S127 (≠ T117), Y155 (= Y141), N218 (≠ H189), L235 (≠ T206), V236 (= V207), F237 (= F208), R250 (= R221), R312 (= R282), D315 (= D285)
2udpA Udp-galactose 4-epimerase complexed with udp-phenol (see paper)
40% identity, 99% coverage: 1:327/329 of query aligns to 1:336/338 of 2udpA
- active site: S124 (≠ T117), A125 (= A118), T126 (≠ A119), Y149 (= Y141), K153 (= K145), M189 (≠ I180)
- binding nicotinamide-adenine-dinucleotide: G7 (= G7), G10 (= G10), Y11 (= Y11), I12 (= I12), D31 (= D31), N32 (= N32), L33 (= L33), C34 (≠ Q34), N35 (≠ S35), S36 (≠ G36), D58 (= D51), I59 (= I52), F80 (= F73), A81 (= A74), G82 (≠ A75), K84 (≠ S77), S122 (= S115), S124 (≠ T117), Y149 (= Y141), K153 (= K145), Y177 (= Y168)
- binding phenyl-uridine-5'-diphosphate: N179 (= N170), N199 (≠ H189), L200 (= L190), A216 (≠ T206), I217 (≠ V207), F218 (= F208), R231 (= R221), Y233 (= Y223), V269 (= V259), R292 (= R282), D295 (= D285)
1udcA Structure of udp-galactose-4-epimerase complexed with udp-mannose (see paper)
40% identity, 99% coverage: 1:327/329 of query aligns to 1:336/338 of 1udcA
- active site: S124 (≠ T117), A125 (= A118), T126 (≠ A119), Y149 (= Y141), K153 (= K145), M189 (≠ I180)
- binding nicotinamide-adenine-dinucleotide: G7 (= G7), G10 (= G10), Y11 (= Y11), I12 (= I12), D31 (= D31), N32 (= N32), C34 (≠ Q34), N35 (≠ S35), S36 (≠ G36), D58 (= D51), I59 (= I52), F80 (= F73), A81 (= A74), G82 (≠ A75), K84 (≠ S77), S122 (= S115), Y149 (= Y141), K153 (= K145), Y177 (= Y168), P180 (≠ V171)
- binding uridine-5'-diphosphate-mannose: T126 (≠ A119), Y149 (= Y141), N179 (= N170), N199 (≠ H189), L200 (= L190), L215 (≠ I205), A216 (≠ T206), I217 (≠ V207), F218 (= F208), R231 (= R221), Y233 (= Y223), V269 (= V259), R292 (= R282)
P09147 UDP-glucose 4-epimerase; Galactowaldenase; UDP-galactose 4-epimerase; EC 5.1.3.2 from Escherichia coli (strain K12) (see 10 papers)
40% identity, 99% coverage: 1:327/329 of query aligns to 1:336/338 of P09147
- YI 11:12 (= YI 11:12) binding NAD(+)
- DNLCNS 31:36 (≠ DNLQSG 31:36) binding NAD(+)
- DI 58:59 (= DI 51:52) binding NAD(+)
- FAGLK 80:84 (≠ FAANS 73:77) binding NAD(+)
- N99 (= N92) binding NAD(+)
- S124 (≠ T117) binding NAD(+); mutation to A: No major structural changes. Catalytic efficiency is very low and affinity binding is 21% of the wild-type enzyme.; mutation to T: No major structural changes. Catalytic efficiency is about 30% of that of the wild-type enzyme, and affinity binding is similar to that of the native enzyme.
- Y149 (= Y141) active site, Proton acceptor; binding NAD(+); mutation to F: No major structural changes. Catalytic efficiency is very low and affinity binding is 12% of the wild-type enzyme.
- K153 (= K145) binding NAD(+); mutation to A: Decreases the catalytic activity. Not reduced by sugars in the presence or absence of UMP. It contains very little NADH.; mutation to M: Decreases the catalytic activity. Not reduced by sugars in the presence or absence of UMP. It contains very little NADH.
- F178 (= F169) binding NAD(+)
- Y299 (≠ L289) mutation to C: Loss of epimerase activity with UDP-Gal by almost 5-fold, but it results in a gain of epimerase activity with uridine diphosphate N-acetylglucosamine (UDP-GlcNAc) by 230-fold with minimal changes in its three-dimensional structure.
3enkA 1.9a crystal structure of udp-glucose 4-epimerase from burkholderia pseudomallei
42% identity, 99% coverage: 2:327/329 of query aligns to 6:339/340 of 3enkA
- active site: S127 (= S116), S128 (≠ T117), T130 (≠ A119), Y152 (= Y141), K156 (= K145)
- binding nicotinamide-adenine-dinucleotide: G11 (= G7), G14 (= G10), Y15 (= Y11), I16 (= I12), D35 (= D31), N36 (= N32), V38 (≠ Q34), N39 (≠ S35), S40 (≠ G36), D62 (= D51), V63 (≠ I52), F84 (= F73), A85 (= A74), A86 (= A75), K88 (≠ S77), N103 (= N92), S126 (= S115), S128 (≠ T117), Y152 (= Y141), K156 (= K145), Y180 (= Y168), P183 (≠ V171)
- binding uridine-5'-diphosphate-glucose: T130 (≠ A119), N182 (= N170), N201 (≠ T188), N202 (≠ H189), L203 (= L190), R219 (≠ T206), V220 (= V207), F221 (= F208), R234 (= R221), Y236 (= Y223), V272 (= V259), R295 (= R282), D298 (= D285)
1kvrA Udp-galactose 4-epimerase complexed with udp-phenol (see paper)
40% identity, 99% coverage: 1:327/329 of query aligns to 1:336/338 of 1kvrA
- active site: A124 (≠ T117), A125 (= A118), T126 (≠ A119), Y149 (= Y141), K153 (= K145), M189 (≠ I180)
- binding nicotinamide-adenine-dinucleotide: G7 (= G7), G10 (= G10), Y11 (= Y11), I12 (= I12), D31 (= D31), N32 (= N32), C34 (≠ Q34), N35 (≠ S35), S36 (≠ G36), D58 (= D51), I59 (= I52), F80 (= F73), A81 (= A74), G82 (≠ A75), K84 (≠ S77), S122 (= S115), S123 (= S116), Y149 (= Y141), K153 (= K145), Y177 (= Y168), P180 (≠ V171)
- binding uridine-5'-diphosphate: N179 (= N170), N198 (≠ T188), N199 (≠ H189), L200 (= L190), A216 (≠ T206), I217 (≠ V207), F218 (= F208), R231 (= R221), Y233 (= Y223), V269 (= V259), R292 (= R282), D295 (= D285)
1udaA Structure of udp-galactose-4-epimerase complexed with udp-4-deoxy-4- fluoro-alpha-d-galactose (see paper)
40% identity, 99% coverage: 1:327/329 of query aligns to 1:336/338 of 1udaA
- active site: S124 (≠ T117), A125 (= A118), T126 (≠ A119), Y149 (= Y141), K153 (= K145), M189 (≠ I180)
- binding nicotinamide-adenine-dinucleotide: G7 (= G7), G10 (= G10), Y11 (= Y11), I12 (= I12), D31 (= D31), N32 (= N32), L33 (= L33), C34 (≠ Q34), N35 (≠ S35), S36 (≠ G36), D58 (= D51), I59 (= I52), F80 (= F73), A81 (= A74), G82 (≠ A75), K84 (≠ S77), S122 (= S115), Y149 (= Y141), K153 (= K145), Y177 (= Y168), P180 (≠ V171)
- binding uridine-5'-diphosphate-4-deoxy-4-fluoro-alpha-d-galactose: T126 (≠ A119), N179 (= N170), N199 (≠ H189), L200 (= L190), A216 (≠ T206), I217 (≠ V207), F218 (= F208), R231 (= R221), Y233 (= Y223), R292 (= R282), D295 (= D285), Y299 (≠ L289)
1naiA Udp-galactose 4-epimerase from escherichia coli, oxidized (see paper)
40% identity, 99% coverage: 1:327/329 of query aligns to 1:336/338 of 1naiA
- active site: S124 (≠ T117), A125 (= A118), T126 (≠ A119), Y149 (= Y141), K153 (= K145), M189 (≠ I180)
- binding nicotinamide-adenine-dinucleotide: G7 (= G7), G10 (= G10), Y11 (= Y11), I12 (= I12), D31 (= D31), N32 (= N32), L33 (= L33), C34 (≠ Q34), N35 (≠ S35), S36 (≠ G36), D58 (= D51), I59 (= I52), F80 (= F73), A81 (= A74), G82 (≠ A75), K84 (≠ S77), Y149 (= Y141), K153 (= K145), Y177 (= Y168), P180 (≠ V171)
- binding 1,3-propandiol: N35 (≠ S35), K84 (≠ S77), E191 (= E182), P193 (vs. gap)
- binding uridine-5'-diphosphate: N179 (= N170), N199 (≠ H189), L200 (= L190), L215 (≠ I205), A216 (≠ T206), R231 (= R221), Y233 (= Y223), R292 (= R282)
1lrjA Crystal structure of e. Coli udp-galactose 4-epimerase complexed with udp-n-acetylglucosamine (see paper)
40% identity, 99% coverage: 1:327/329 of query aligns to 1:336/338 of 1lrjA
- active site: S124 (≠ T117), A125 (= A118), T126 (≠ A119), Y149 (= Y141), K153 (= K145), M189 (≠ I180)
- binding nicotinamide-adenine-dinucleotide: G7 (= G7), G10 (= G10), Y11 (= Y11), I12 (= I12), D31 (= D31), N32 (= N32), L33 (= L33), C34 (≠ Q34), N35 (≠ S35), S36 (≠ G36), D58 (= D51), I59 (= I52), F80 (= F73), A81 (= A74), G82 (≠ A75), K84 (≠ S77), Y149 (= Y141), K153 (= K145), Y177 (= Y168), P180 (≠ V171)
- binding uridine-diphosphate-n-acetylglucosamine: V86 (= V79), S124 (≠ T117), F178 (= F169), N179 (= N170), L200 (= L190), L215 (≠ I205), A216 (≠ T206), F218 (= F208), R231 (= R221), Y233 (= Y223), V269 (= V259), R292 (= R282), D295 (= D285)
Q14376 UDP-glucose 4-epimerase; Galactowaldenase; UDP-N-acetylgalactosamine 4-epimerase; UDP-GalNAc 4-epimerase; UDP-N-acetylglucosamine 4-epimerase; UDP-GlcNAc 4-epimerase; UDP-galactose 4-epimerase; EC 5.1.3.2; EC 5.1.3.7 from Homo sapiens (Human) (see 13 papers)
40% identity, 99% coverage: 3:327/329 of query aligns to 5:344/348 of Q14376
- GYI 12:14 (= GYI 10:12) binding NAD(+)
- DNFHN 33:37 (≠ DNLQS 31:35) binding NAD(+)
- N34 (= N32) to S: in GALAC3; peripheral; nearly normal activity towards UDP-galactose; dbSNP:rs121908046
- DI 66:67 (= DI 51:52) binding NAD(+)
- F88 (= F73) binding NAD(+)
- G90 (≠ A75) to E: in GALAC3; 800-fold decrease in UDP-galactose epimerization activity; dbSNP:rs28940882
- K92 (≠ S77) binding NAD(+)
- V94 (= V79) to M: in GALAC3; generalized; 30-fold decrease in UDP-galactose epimerization activity; 2-fold decrease in affinity for UDP-galactose; 24% of normal activity with respect to UDP-N-acetylgalactosamine; dbSNP:rs121908047
- D103 (≠ L88) to G: in GALAC3; 7-fold decrease in UDP-galactose epimerization activity; very mild decrease in activity towards UDP-N-acetylgalactosamine; dbSNP:rs28940883
- S132 (≠ T117) mutation to A: Loss of activity.
- SAT 132:134 (≠ TAA 117:119) binding substrate
- Y157 (= Y141) active site, Proton acceptor; mutation to F: Loss of activity.
- K161 (= K145) binding NAD(+)
- A180 (≠ Y163) to V: in dbSNP:rs3204468
- L183 (= L166) to P: in GALAC3; peripheral; 3-fold decrease in UDP-galactose epimerization activity; dbSNP:rs121908045
- Y185 (= Y168) binding NAD(+)
- YFN 185:187 (= YFN 168:170) binding substrate
- NNL 206:208 (≠ THL 188:190) binding substrate
- NVF 224:226 (≠ TVF 206:208) binding substrate
- R239 (= R221) binding substrate
- K257 (≠ Y239) to R: in GALAC3; 7-fold decrease in UDP-galactose epimerization activity; does not affect affinity for UDP-galactose; dbSNP:rs28940884
- REGD 300:303 (≠ RSGD 282:285) binding substrate
- C307 (≠ L289) mutation to Y: No effect on activity towards UDP-galactose. Loss of activity towards UDP-N-acetylgalactosamine.
- L313 (≠ K295) to M: in GALAC3; 6-fold decrease in UDP-galactose epimerization activity; very mild decrease in activity towards UDP-N-acetylgalactosamine; dbSNP:rs3180383
- G319 (= G301) to E: in GALAC3; nearly normal activity towards UDP-galactose; mild impairment under conditions of substrate limitation; dbSNP:rs28940885
- R335 (≠ K318) to H: in GALAC3; 2-fold decrease in UDP-galactose epimerization activity; dbSNP:rs368637540
Query Sequence
>NP_349562.1 NCBI__GCF_000008765.1:NP_349562.1
MSILVCGGAGYIGSHTVHELIESGKEVVIVDNLQSGHLQAVNKKAKFYKGDIRDSEFLDK
VFSENKIQSIIHFAANSLVGESMEKPLLYFNNNVYGMQILLESMVKHNIKNIVFSSTAAV
YGEPKKIPILESDDTNPTNTYGETKLTMEKMMKWSSKAYGINYVALRYFNVAGALDDGSI
GEDHNPETHLIPLILQVPLKKRPFITVFGTDYPTPDGTCIRDYIHVIDLAAAHIKAVEYL
ENGGKSSIFNLGNGVGFSVKEMIDAAREVTKQNIKVVLGERRSGDPAQLVASSQKAKEVL
GWSPKFTNVKDIIKDAWKWHETHPNGFDA
Or try a new SitesBLAST search
SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory