Comparing NP_661230.1 NCBI__GCF_000006985.1:NP_661230.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
7d0aB Acinetobacter mlafedb complex in adp-vanadate trapped vclose conformation (see paper)
38% identity, 98% coverage: 1:238/244 of query aligns to 4:241/263 of 7d0aB
7d08B Acinetobacter mlafedb complex in atp-bound vtrans1 conformation (see paper)
38% identity, 98% coverage: 1:238/244 of query aligns to 4:241/263 of 7d08B
6z5uK Cryo-em structure of the a. Baumannii mlabdef complex bound to appnhp (see paper)
38% identity, 98% coverage: 1:238/244 of query aligns to 2:239/253 of 6z5uK
Q9AT00 Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic; ABC transporter I family member 13; ABC transporter ABCI.13; AtABCI13; Non-intrinsic ABC protein 11; AtNAP11 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
36% identity, 96% coverage: 1:234/244 of query aligns to 84:332/345 of Q9AT00
7ch6C Cryo-em structure of e.Coli mlafeb with amppnp (see paper)
35% identity, 97% coverage: 1:237/244 of query aligns to 4:240/265 of 7ch6C
6xgyA Crystal structure of e. Coli mlafb abc transport subunits in the dimeric state (see paper)
35% identity, 97% coverage: 1:237/244 of query aligns to 4:240/264 of 6xgyA
7cgnB The overall structure of the mlafedb complex in atp-bound eqtall conformation (mutation of e170q on mlaf) (see paper)
35% identity, 97% coverage: 1:237/244 of query aligns to 4:240/263 of 7cgnB
7chaI Cryo-em structure of p.Aeruginosa mlafebd with amppnp (see paper)
31% identity, 97% coverage: 2:237/244 of query aligns to 4:239/262 of 7chaI
P30750 Methionine import ATP-binding protein MetN; EC 7.4.2.11 from Escherichia coli (strain K12) (see 3 papers)
40% identity, 89% coverage: 1:217/244 of query aligns to 1:220/343 of P30750
Sites not aligning to the query:
3tuzC Inward facing conformations of the metni methionine abc transporter: cy5 semet soak crystal form (see paper)
39% identity, 89% coverage: 1:217/244 of query aligns to 2:221/344 of 3tuzC
Sites not aligning to the query:
3tuiC Inward facing conformations of the metni methionine abc transporter: cy5 native crystal form (see paper)
39% identity, 89% coverage: 1:217/244 of query aligns to 2:221/344 of 3tuiC
6cvlD Crystal structure of the escherichia coli atpgs-bound metni methionine abc transporter in complex with its metq binding protein (see paper)
39% identity, 89% coverage: 1:217/244 of query aligns to 2:221/344 of 6cvlD
7ch8I Cryo-em structure of p.Aeruginosa mlafebd with adp-v (see paper)
29% identity, 97% coverage: 2:237/244 of query aligns to 4:236/259 of 7ch8I
7ahhC Opua inhibited inward-facing, sbd docked (see paper)
33% identity, 94% coverage: 10:239/244 of query aligns to 35:265/382 of 7ahhC
Sites not aligning to the query:
7aheC Opua inhibited inward facing (see paper)
33% identity, 94% coverage: 10:239/244 of query aligns to 35:265/382 of 7aheC
Sites not aligning to the query:
P69874 Spermidine/putrescine import ATP-binding protein PotA; EC 7.6.2.11 from Escherichia coli (strain K12) (see 3 papers)
32% identity, 93% coverage: 1:228/244 of query aligns to 17:238/378 of P69874
Sites not aligning to the query:
3d31A Modbc from methanosarcina acetivorans (see paper)
34% identity, 89% coverage: 1:217/244 of query aligns to 1:207/348 of 3d31A
Sites not aligning to the query:
2d62A Crystal structure of multiple sugar binding transport atp- binding protein
33% identity, 88% coverage: 2:216/244 of query aligns to 7:221/375 of 2d62A
1oxvD Crystal structure of glcv, the abc-atpase of the glucose abc transporter from sulfolobus solfataricus (see paper)
33% identity, 92% coverage: 4:228/244 of query aligns to 6:231/353 of 1oxvD
1oxvA Crystal structure of glcv, the abc-atpase of the glucose abc transporter from sulfolobus solfataricus (see paper)
33% identity, 92% coverage: 4:228/244 of query aligns to 6:231/353 of 1oxvA
>NP_661230.1 NCBI__GCF_000006985.1:NP_661230.1
MIELRNVTLRYGEKVILDKVSLTVQDNTIKAILGPSGVGKSTIIKLMLGLIKPNSGQVFV
DGVDITPLKEADLYPIRRKMGIVFQGNALFDSMTISQNMSFFLRENLQLPDDEIDRRVAE
QIRFAGLEGYEDQLPESLSGGMQKRVAIGRALIFNPKMILFDEPTAGLDPVSSHKILNLI
ASLKKSNDLGAVFVTHIIDDVFAIADEVAVLYQSKIIFDGPTGQLHDSQHPFIKSILSDK
ILEL
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Lawrence Berkeley National Laboratory