Comparing PP_0228 FitnessBrowser__Putida:PP_0228 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 16 hits to proteins with known functional sites (download)
3p47A Crystal structure of entamoeba histolytica serine acetyltransferase 1 in complex with l-cysteine (see paper)
39% identity, 83% coverage: 40:297/310 of query aligns to 29:268/270 of 3p47A
3q1xA Crystal structure of entamoeba histolytica serine acetyltransferase 1 in complex with l-serine (see paper)
39% identity, 83% coverage: 40:297/310 of query aligns to 27:266/267 of 3q1xA
7bw9A Crystal structure of serine acetyltransferase isoform 3 in complex with cysteine from entamoeba histolytica
39% identity, 87% coverage: 33:302/310 of query aligns to 20:272/280 of 7bw9A
4n69A Soybean serine acetyltransferase complexed with serine (see paper)
43% identity, 54% coverage: 127:292/310 of query aligns to 74:230/243 of 4n69A
4hzdA Crystal structure of serine acetyltransferase in complex with coenzyme a from brucella abortus strain s19 (see paper)
38% identity, 62% coverage: 112:302/310 of query aligns to 57:239/250 of 4hzdA
Sites not aligning to the query:
6wyeA Crystal structure of neisseria gonorrhoeae serine acetyltransferase (cyse) (see paper)
36% identity, 59% coverage: 111:292/310 of query aligns to 59:232/261 of 6wyeA
7ra4A Crystal structure of neisseria gonorrhoeae serine acetyltransferase (cyse) in complex with serine (see paper)
36% identity, 59% coverage: 111:292/310 of query aligns to 57:230/243 of 7ra4A
4h7oA Crystal structure of serine acetyltransferase from vibrio cholerae o1 biovar el tor n16961
33% identity, 70% coverage: 81:297/310 of query aligns to 36:232/258 of 4h7oA
1ssqD Serine acetyltransferase- complex with cysteine (see paper)
37% identity, 56% coverage: 136:309/310 of query aligns to 80:244/257 of 1ssqD
3gvdI Crystal structure of serine acetyltransferase cyse from yersinia pestis
39% identity, 52% coverage: 136:296/310 of query aligns to 87:238/272 of 3gvdI
4n6bA Soybean serine acetyltransferase complexed with coa (see paper)
41% identity, 54% coverage: 127:292/310 of query aligns to 70:220/233 of 4n6bA
Sites not aligning to the query:
1t3dA Crystal structure of serine acetyltransferase from e.Coli at 2.2a (see paper)
36% identity, 56% coverage: 124:296/310 of query aligns to 72:235/262 of 1t3dA
8i04A Crystal structure of serine acetyltransferase from salmonella typhimurium complexed with serine (see paper)
36% identity, 56% coverage: 124:296/310 of query aligns to 68:231/258 of 8i04A
8i09A Crystal structure of serine acetyltransferase from salmonella typhimurium complexed with butyl gallate (see paper)
36% identity, 56% coverage: 124:296/310 of query aligns to 71:234/246 of 8i09A
Sites not aligning to the query:
8i06A Crystal structure of serine acetyltransferase from salmonella typhimurium complexed with coa (see paper)
36% identity, 56% coverage: 124:296/310 of query aligns to 72:235/244 of 8i06A
Sites not aligning to the query:
1sstA Serine acetyltransferase- complex with coa (see paper)
38% identity, 51% coverage: 136:292/310 of query aligns to 80:220/233 of 1sstA
Sites not aligning to the query:
>PP_0228 FitnessBrowser__Putida:PP_0228
MSEQPSSAHWQLQSIVTGLRGAREQWRTRNGRSIGEQGGRELPSREAMRQILEQLCGALF
PMRLGPVDLREESEDFYVGHTLDAALTALLAQARLELRYAARQSKAELAGVDARALSLIQ
GFAAALPELRVLLDTDVLAAYHGDPAARSVDEVLLCYPGILAIIHHRLAHHLYKAGLPLL
ARISSELAHSATGIDIHPGAQIGPSFFIDHGTGVVIGETAIIGERVRIYQAVTLGAKRFP
SDESGTLHKGLPRHPIVEDDVVIYAGATVLGRITIGKGSTIGGNVWLTRSVPAESNITQA
NLQLDCQDKN
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory