SitesBLAST

Comparing PP_0311 FitnessBrowser__Putida:PP_0311 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found no hits to proteins with known functional sites (download)

Query Sequence

>PP_0311 FitnessBrowser__Putida:PP_0311
MLNTLLPILLFAALGLAVLGALRRVRMWRRGRPSKVNLIGGLLAMPRRYLVDLHHVVERD
KYMSKTHVATAGGFVLSAVLAILVHGFGLQSKILGYALLIATVIMFTGAIFVFKRRLNPP
SRLSKGPWMRLPKSLLAFAVSFFIATLPVAGILPANTGGWVMVAILGLGVLWGVSELFFG
MTWGGPMKHAFAGALHLAWHRRAERFGGGRSTGLKPLDLEDPNAPLGVEKPVDFTWNQLL
GFDACVQCGKCEAMCPAFAAGQPLNPKKLIQDMVIGLAGGTDAQFAGSPYPGKPIGEHGG
NPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEKGATPNKGAEV
LDNLIATDNPGGFAPGGRMNWAADLNLQLLSEVKVTEVLFWVGDGAFDMRNQRTLRSFVK
VLKASGVDFAVLGLEERDSGDVARRLGDEATFQQLAKRNIQTLAKYKFQRIVTCDPHSFH
VLKNEYGALGGDYQVQHHSTYIAELIAAKKLNLGQHKGGSVTYHDPCYLGRYNGEYEAPR
EVLKALGIEVREMQRSGFRSRCCGGGGGAPITDIPGKQRIPDMRMDDIRETEAELVAVGC
PQCTAMLEGVVEPRPQIKDLAELVADVLIEEDASTVPKPQTAKREPAEVH

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SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.