Comparing PP_1403 FitnessBrowser__Putida:PP_1403 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
6r5nA The crystal structure of glycoside hydrolase bglx from p. Aeruginosa in complex with 1-deoxynojirimycin (see paper)
64% identity, 96% coverage: 29:763/763 of query aligns to 2:733/733 of 6r5nA
6r5iA The crystal structure of the glycoside hydrolase bglx from p. Aeruginosa (see paper)
64% identity, 96% coverage: 29:763/763 of query aligns to 2:733/733 of 6r5iA
6r5tA The crystal structure of glycoside hydrolase bglx inactive mutant d286n from p. Aeruginosa in complex with lactose (see paper)
64% identity, 96% coverage: 29:763/763 of query aligns to 2:733/733 of 6r5tA
6r5vA The crystal structure of glycoside hydrolase bglx inactive mutant d286n from p. Aeruginosa in complex with xylotriose (see paper)
64% identity, 96% coverage: 29:763/763 of query aligns to 2:730/730 of 6r5vA
6r5oA The crystal structure the glycoside hydrolase bglx inactive mutant d286n from p. Aeruginosa in complex with two glucose molecules (see paper)
64% identity, 96% coverage: 29:763/763 of query aligns to 2:730/730 of 6r5oA
3u48B From soil to structure: a novel dimeric family 3-beta-glucosidase isolated from compost using metagenomic analysis
50% identity, 96% coverage: 33:763/763 of query aligns to 5:735/742 of 3u48B
5tf0A Crystal structure of glycosil hydrolase family 3 n-terminal domain protein from bacteroides intestinalis
47% identity, 96% coverage: 28:762/763 of query aligns to 1:733/733 of 5tf0A
5xxmA Crystal structure of gh3 beta-glucosidase from bacteroides thetaiotaomicron in complex with gluconolactone (see paper)
46% identity, 96% coverage: 28:762/763 of query aligns to 3:746/749 of 5xxmA
5xxnA Crystal structure of mutant (d286n) beta-glucosidase from bacteroides thetaiotaomicron in complex with sophorose (see paper)
46% identity, 96% coverage: 29:762/763 of query aligns to 1:735/744 of 5xxnA
4zoaA Crystal structure of beta-glucosidase from listeria innocua in complex with isofagomine (see paper)
43% identity, 95% coverage: 30:755/763 of query aligns to 2:704/716 of 4zoaA
4zobA Crystal structure of beta-glucosidase from listeria innocua in complex with gluconolactone (see paper)
42% identity, 95% coverage: 30:755/763 of query aligns to 2:710/722 of 4zobA
4zo7A Crystal structure of mutant (d270a) beta-glucosidase from listeria innocua in complex with gentiobiose (see paper)
42% identity, 95% coverage: 30:755/763 of query aligns to 2:712/724 of 4zo7A
4zo6B Crystal structure of mutant (d270a) beta-glucosidase from listeria innocua in complex with cellobiose (see paper)
42% identity, 95% coverage: 30:755/763 of query aligns to 2:712/724 of 4zo6B
7zdyW Crystal structure of beta-xylosidase from thermotoga maritima in complex with methyl-beta-d-xylopyranoside
36% identity, 96% coverage: 26:756/763 of query aligns to 7:734/763 of 7zdyW
7zb3A Crystal structure of beta-xylosidase from thermotoga maritima in complex with xylohexaose hydrolysed to xylobiose
35% identity, 96% coverage: 26:756/763 of query aligns to 7:734/765 of 7zb3A
7zgzX Crystal structure of beta-xylosidase from thermotoga maritima in complex with methyl-beta-d-xylopyranoside hydrolysed to xylose
36% identity, 96% coverage: 26:756/763 of query aligns to 7:723/753 of 7zgzX
8c7fA Crystal structure of beta-xylosidase mutant (d281n, e517q) from thermotoga maritima in complex with xylopentaose
35% identity, 96% coverage: 26:756/763 of query aligns to 7:743/772 of 8c7fA
5z9sA Functional and structural characterization of a beta-glucosidase involved in saponin metabolism from intestinal bacteria (see paper)
35% identity, 94% coverage: 34:753/763 of query aligns to 5:753/765 of 5z9sA
5z87A Structural of a novel b-glucosidase emgh1 at 2.3 angstrom from erythrobacter marinus
36% identity, 91% coverage: 73:763/763 of query aligns to 60:756/756 of 5z87A
5yqsA Isoprimeverose-producing enzyme from aspergillus oryzae in complex with isoprimeverose (see paper)
34% identity, 88% coverage: 86:756/763 of query aligns to 79:746/754 of 5yqsA
Sites not aligning to the query:
>PP_1403 FitnessBrowser__Putida:PP_1403
MMKLSLLGLAMGLASQAALAAPTAPPLQDKQAFIEHLISQMTEAEKIGQLRLISIGPEMP
RDKIREEIAAGRIGGTFNSRTAPENRPMQDAAMRSRLKIPMFFAYDTVHGERTIFPIGLG
MAATWDMEAVAKVGRTAAIEASADALDMTFAPMVDIARDPRWGRTSEGFGEDTYLTSRIG
QVMVRSFQGSSPANPDSIMAIVKHFALYGAVEGGRDYNTVDMSLPKMYNDYLPPYRAALD
AGAGGVMVALNSINGVPATSNTWLMNDLLRKEWGFKGVTISDHGAIQELIRHGVARDGRE
AAKLAIKAGIDMSMNDTLYGEELPGLLKSGEVTQRELDQAVREVLGAKYDMGLFKDPYVR
IGKAETDLKDYYGNDRLHREAARDVARRSLVLLENRNQTLPLKKAGTIALVGPLADAPID
MMGSWAADGKPVHSVTVREGLRRAVEGKAKLVYAKGSNVTGDKAIFDYLNFLNFDAPEIV
DDPRPPAVLIDEAIKAAKQSDVVVAVVGESRGMSHESSSRTTLEIPASQRELIKALKATG
KPLVLVLMNGRPLSISWEREQADAILETWFAGTEGGNAIADVLFGDYNPSGKLAITFPRS
VGQIPMYYNHTRIGRPFTPGKPGNYTSQYFEEPNGPLYPFGYGLSYSSFELSGLNLSSKD
LKRGDTLDAKVTVKNTGKVAGETVVQLYLQDVSASMSRPVKELKNFQKLMLEPGETRTLT
FRISEDDLKFYNGQLQRVAEPGEFNVQVGLDSQAVQQQSFELL
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory