Comparing PP_2021 FitnessBrowser__Putida:PP_2021 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 2 hits to proteins with known functional sites (download)
P52697 6-phosphogluconolactonase; 6-P-gluconolactonase; Pgl; EC 3.1.1.31 from Escherichia coli (strain K12) (see paper)
28% identity, 86% coverage: 35:359/376 of query aligns to 12:313/331 of P52697
1jofB Neurospora crassa 3-carboxy-cis,cis-mucoante lactonizing enzyme (see paper)
22% identity, 86% coverage: 25:349/376 of query aligns to 5:338/365 of 1jofB
>PP_2021 FitnessBrowser__Putida:PP_2021
MNRTWTSLLTASLMSLTISAHAATLLVGSYTDGASQGIYRYHFDDKAGQIGPTPLQVVKS
VSPSWLVLSADQRQLFAVNETPQGHASSFSISSKGEIKPLNQVVTQGDEPTHASLSRDQR
YLFVANYAVNPDPGGSLVVIPVAKDGTLKPVVQQARHKASGVNPERQAGAHVHSLVLSPD
GQHLYASDLGADKVFIYRYDGASADHPLTAAIPASVALPPGSGPRHLLFDAKGRHAYLTL
EMNAEVVMFDVQDGNLVERQRLPLTERQEAAAKAAGGLHLSADGRFLYVSNRGTANEIVA
FSVGKQDGQLTFLQRRPAEGDHPREFALDPSDNFLLVANQKSNQIVVIRRDPRSGKLLET
VQTLKQDAPSDLKFIE
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory