SitesBLAST

SitesBLAST – Find functional sites

SitesBLAST

Comparing PP_2723 FitnessBrowser__Putida:PP_2723 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 20 (the maximum) hits to proteins with known functional sites (download)

3i3oA 2.06 angstrom resolution crystal structure of a short chain dehydrogenase from bacillus anthracis str. 'Ames ancestor' in complex with NAD-acetone
50% identity, 96% coverage: 9:281/285 of query aligns to 4:277/282 of 3i3oA

query
sites
3i3oA

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active site: G49 (= G53), S174 (= S178), L184 (= L188), Y187 (= Y191), K191 (= K195), K232 (≠ E236)
binding magnesium ion: D47 (= D51), S48 (= S52), E72 (= E76)
binding nicotinamide adenine dinucleotide acetone adduct: G45 (= G49), D47 (= D51), S48 (= S52), G49 (= G53), I50 (= I54), Y69 (= Y73), L70 (= L74), E72 (= E76), G95 (= G99), D96 (= D100), L97 (= L101), N123 (= N127), V124 (≠ A128), A125 (= A129), Q126 (≠ F130), Q127 (= Q131), I147 (≠ T151), T172 (= T176), S174 (= S178), Y187 (= Y191), K191 (= K195), P217 (= P221), G218 (= G222), I220 (= I224), T222 (= T226), L224 (= L228)

3ijrF 2.05 angstrom resolution crystal structure of a short chain dehydrogenase from bacillus anthracis str. 'Ames ancestor' in complex with NAD+
50% identity, 96% coverage: 9:281/285 of query aligns to 12:285/290 of 3ijrF

query
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3ijrF

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active site: G57 (= G53), S182 (= S178), L192 (= L188), Y195 (= Y191), K199 (= K195), K240 (≠ E236)
binding magnesium ion: D55 (= D51), S56 (= S52), E80 (= E76)
binding nicotinamide-adenine-dinucleotide: P21 (= P17), D55 (= D51), S56 (= S52), G57 (= G53), I58 (= I54), Y77 (= Y73), L78 (= L74), E80 (= E76), G103 (= G99), D104 (= D100), L105 (= L101), N131 (= N127), V132 (≠ A128), A133 (= A129), Q134 (≠ F130), I155 (≠ T151), T180 (= T176), S182 (= S178), Y195 (= Y191), K199 (= K195), P225 (= P221), G226 (= G222), P227 (= P223), I228 (= I224), T230 (= T226), L232 (= L228)

5jydB Crystal structure of a putative short chain dehydrogenase from burkholderia cenocepacia
50% identity, 99% coverage: 4:285/285 of query aligns to 9:292/292 of 5jydB

query
sites
5jydB

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active site: G58 (= G53), S184 (= S178), L194 (= L188), Y197 (= Y191), K201 (= K195), P242 (≠ D235)
binding magnesium ion: D56 (= D51), S57 (= S52), E82 (= E76)
binding nicotinamide-adenine-dinucleotide: G54 (= G49), D56 (= D51), S57 (= S52), G58 (= G53), I59 (= I54), L79 (= L74), E82 (= E76), D106 (= D100), I107 (≠ L101), N133 (= N127), A134 (= A128), A135 (= A129), T182 (= T176), S184 (= S178), Y197 (= Y191), K201 (= K195), P227 (= P221), G228 (= G222), P229 (= P223), Y230 (≠ I224), T232 (= T226), L234 (= L228), Q235 (≠ I229)

3r3sA Structure of the ygha oxidoreductase from salmonella enterica
49% identity, 99% coverage: 2:284/285 of query aligns to 7:291/292 of 3r3sA

query
sites
3r3sA

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active site: G58 (= G53), S184 (= S178), L194 (= L188), Y197 (= Y191), K201 (= K195), Q242 (≠ D235)
binding magnesium ion: D56 (= D51), S57 (= S52), E82 (= E76)
binding nicotinamide-adenine-dinucleotide: D56 (= D51), S57 (= S52), G58 (= G53), I59 (= I54), L79 (= L74), E82 (= E76), D106 (= D100), L107 (= L101), V133 (≠ N127), A134 (= A128), G135 (≠ A129), S184 (= S178), Y197 (= Y191), K201 (= K195), P227 (= P221), G228 (= G222), I230 (= I224), T232 (= T226), L234 (= L228), Q235 (vs. gap)

P0AG84 Uncharacterized oxidoreductase YghA; EC 1.-.-.- from Escherichia coli (strain K12) (see paper)
48% identity, 99% coverage: 2:282/285 of query aligns to 9:291/294 of P0AG84

query
sites
P0AG84

S

T

D

Q

Y

Y

P

Y

T

T

P

G

P

E

F

Y

P

P

S

K

Q

Q

P

K

Q

Q

S

P

V

T

P

P

G

G

S

I

Q

Q

R

A

K

K

M

M

D

T

P

P

Y

V

P

P

D

D

C

C

G

G

E

E

Q
x
K

S

T

Y

Y

T

V

G

G

N

S

N

G

R

R

L

L

A

K

G

D

K

R

I

K

A

A

L

L

I

V

T

T

G

G

A

G

D

D

S

S

G

G

I

I

G

G

R

R

A

A

V

A

A

A

I

I

A

A

Y

Y

A

A

R

R

E

E

G

G

A

A

D

D

V

V

A

A

I

I

A

S

Y

Y

L

L

-

P

N

V

E

E

H

E

D

E

D

D

A

A

Q

Q

E

D

T

V

A

K

R

K

W

I

V

I

K

E

A

E

A

C

G

G

R

R

Q

K

C

A

L

V

L

L

P

P

G

G

D

D

L

L

A

S

Q

D

K

E

Q

K

H

F

C

A

H

R

D

S

I

L

V

V

D

H

K

E

T

A

V

H

A

K

Q

A

F

L

G

G

R

G

I

L

D

D

I

I

L

M

V

A

N

L

N

V

A

A

A

G

F

K

Q

Q

M

V

A

A

H

I

E

P

S

D

L

I

D

A

D

D

I

L

D

T

D

S

D

E

E

Q

W

F

V

Q

K

K

T

T

F

F

D

A

T

I

N

N

I

V

T

F

A

A

I

L

F

F

R

W

I

L

C

T

Q

Q

R

E

A

A

L

I

P

P

S

L

M

L

P

P

K

K

G

G

G

A

S

S

I

I

N

T

T

T

S

S

V

I

N

Q

S

A

D

Y

D

Q

P

P

S

S

P

P

S

H

L

L

A

D

Y

Y

A

A

T

T

K

K

G

A

A

A

I

I

A

L

N

N

F

Y

T

S

A

R

G

G

L

L

A

A

Q

K

L

Q

L

V

G

A

K

E

Q

K

G

G

I

I

R

R

V

V

N

N

S

I

V

V

A

A

P

P

G

G

P

P

I

I

W

W

T

T

P

A

L

L

-

Q

I

I

P

S

A

G

T

G

M

Q

P

T

D

Q

E

D

A

K

V

I

R

P

N

Q

F

F

G

G

S

Q

G

Q

Y

T

P

P

M

M

G

K

R

R

P

A

G

G

Q

Q

P

P

V

A

E

E

V

L

A

A

P

P

I

V

Y

Y

V

V

L

Y

L

L

G

A

S

S

D

Q

E

E

A

S

S

S

Y

Y

I

V

S

T

G

A

S

E

R

V

Y

H

A

G

V

V

T

C

G

G

K

E

K39 (≠ Q32) modified: N6-acetyllysine

6ixmC Crystal structure of the ketone reductase chkred20 from the genome of chryseobacterium sp. Ca49 complexed with NAD (see paper)
36% identity, 85% coverage: 40:281/285 of query aligns to 3:244/248 of 6ixmC

query
sites
6ixmC

L

L

A

D

G

N

K

K

I

V

A

A

L

L

I

V

T

T

G
|
G

A

A

D

G

S
|
S

G
|
G

I
|
I

G

G

R

L

A

A

V

V

A

A

I

H

A

S

Y

Y

A

A

R

K

E

E

G

G

A

A

D

K

V

V

A

I

I

V

A

S

Y
x
D

L
x
I

N

N

E

E

H

-

D

D

D

H

A

G

Q

N

E

K

T

A

A

V

R

E

W

D

V

I

K

K

A

A

A

Q

G

G

R

G

Q

E

C

A

L

S

L

F

L

V

P

K

G
x
A

D
|
D

L
x
T

A

S

Q

N

K

P

Q

E

H

E

C

V

H

E

D

A

I

L

V

V

D

K

K

R

T

T

V

V

A

E

Q

I

F

Y

G

G

R

R

I

L

D

D

I

I

L

A

V

C

N

N

N
|
N

A
|
A

A

G

F

I

Q

G

M

G

A

E

H

Q

E

A

S

L

L

A

D

G

D

D

I

Y

D

G

D

L

D

D

E

S

W

W

V

R

K

K

T

V

F

L

D

S

T

I

N

N

I

L

T

D

A

G

I

V

F

F

R

Y

I

G

C

C

Q

K

R

Y

A

E

L

L

P

E

S

Q

M

M

P

E

K

K

-

N

-

G

G

G

S

V

I

I

I

V

N

N

T
x
M

S

A

S
|
S

V

I

N

H

S

G

D

I

D

V

P

A

S

A

P

P

S

L

L

S

A

A

Y
|
Y

A

T

A

S

T

A

K
|
K

G

H

A

A

I

V

A

V

N

G

F

L

T

T

A

K

G

N

L

I

A

G

Q

A

L

E

L

Y

G

G

K

Q

Q

K

G

N

I

I

R

R

V

C

N

N

S

A

V

V

A

G

P
|
P

G
x
A

P
x
Y

I
|
I

W

E

T

T

P

P

L
|
L

I

L

P

E

A

-

T

S

M

L

P

T

D

K

E

E

A

M

V

K

R

E

N

A

F

L

G

I

S

S

G

K

Y

H

P

P

M

M

G

G

R

R

P

L

G

G

Q

K

P

P

V

E

E

E

V

V

A

A

P

E

I

L

Y

V

V

L

L

F

L

L

G

S

S

S

D

E

E

K

A

S

S

S

Y

F

I

M

S

T

G

G

S

G

R

Y

Y

Y

A

L

V

V

T

D

G

G

active site: G16 (= G53), S142 (= S178), Y155 (= Y191), K159 (= K195)
binding nicotinamide-adenine-dinucleotide: G12 (= G49), S15 (= S52), G16 (= G53), I17 (= I54), D36 (≠ Y73), I37 (≠ L74), A61 (≠ G99), D62 (= D100), T63 (≠ L101), N89 (= N127), A90 (= A128), M140 (≠ T176), S142 (= S178), Y155 (= Y191), K159 (= K195), P185 (= P221), A186 (≠ G222), Y187 (≠ P223), I188 (= I224), L192 (= L228)

3ay6B Crystal structure of bacillus megaterium glucose dehydrogenase 4 a258f mutant in complex with nadh and d-glucose (see paper)
34% identity, 85% coverage: 40:281/285 of query aligns to 11:255/267 of 3ay6B

query
sites
3ay6B

L

L

A

K

G

D

K

K

I

V

A

V

L

V

I

I

T

T

G
|
G

A

G

D

S

S
x
T

G
|
G

I
x
L

G

G

R

R

A

A

V

M

A

A

I

V

A

R

Y

F

A

G

R

Q

E

E

G

E

A

A

D

K

V

V

A

V

I

I

A

N

Y

Y

L
x
Y

N

N

E

N

H

E

D

E

A

A

Q

L

E

D

T

A

A

K

R

K

W

E

V

V

K

E

A

E

A

A

G

G

R

G

Q

Q

C

A

L

I

L

V

P

Q

G

G

D
|
D

L
x
V

A

T

Q

K

K

E

Q

E

H

D

C

V

H

V

D

N

I

L

V

V

D

Q

K

T

T

A

V

I

A

K

Q

E

F

F

G

G

R

T

I

L

D

D

I

V

L

M

V

I

N

N

N
|
N

A
|
A

A
x
G

F
x
V

Q
x
E

M

N

-

P

-

V

-

P

A

S

H

H

E

E

S

-

L

-

D

-

I

L

D

S

D

L

D

D

E

N

W

W

V

N

K

K

T

V

F

I

D

D

T

T

N

N

I

L

T

T

A

G

I

A

F

F

R

L

I

G

C

S

Q

R

R

E

A

A

L

I

P

K

S

Y

M

F

P

V

K

E

G

N

-

D

-

I

-

K

G

G

S

N

I

V

I

I

N

N

T
x
M

S

S

S
|
S

V

V

N
x
H

S

E

D

M

D

I

P

P

S
x
W

P

P

S

L

L

F

L

V

A

H

Y
|
Y

A

A

T

S

K
|
K

G

G

A

G

I

M

A

K

N

L

F

M

T

T

A

E

G

T

L

L

A

A

Q

L

L

E

L

Y

G

A

K

P

Q

K

G

G

I

I

R

R

V

V

N

N

S

N

V

I

A

G

P
|
P

G
|
G

P

A

I
x
M

W

N

T
|
T

P
|
P

L
x
I

I
x
N

P

A

A

E

T
x
K

M

F

P

A

D

D

E

P

A

V

V

Q

R

R

-

A

N

D

F

V

G

E

S

S

G

M

Y

I

P

P

M

M

G

G

R

Y

P

I

G

G

Q

K

P

P

V

E

E

E

V

V

A

A

P

A

I

V

Y

A

V

A

L

F

L

L

G

A

S

S

D

S

E

Q

A

A

S

S

Y

Y

I

V

S

T

G

G

S

I

R

T

Y

L

A

F

V

A

T

D

G

G

active site: G24 (= G53), S151 (= S178), Y164 (= Y191), K168 (= K195)
binding beta-D-glucopyranose: E102 (≠ Q131), S151 (= S178), H153 (≠ N180), W158 (≠ S185), Y164 (= Y191), N202 (≠ I229), K205 (≠ T232)
binding 1,4-dihydronicotinamide adenine dinucleotide: G20 (= G49), T23 (≠ S52), G24 (= G53), L25 (≠ I54), Y45 (≠ L74), D71 (= D100), V72 (≠ L101), N98 (= N127), A99 (= A128), G100 (≠ A129), V101 (≠ F130), M149 (≠ T176), S151 (= S178), Y164 (= Y191), K168 (= K195), P194 (= P221), G195 (= G222), M197 (≠ I224), T199 (= T226), P200 (= P227), I201 (≠ L228), N202 (≠ I229)

P40288 Glucose 1-dehydrogenase; EC 1.1.1.47 from Priestia megaterium (Bacillus megaterium) (see 2 papers)
34% identity, 85% coverage: 40:281/285 of query aligns to 5:249/261 of P40288

query
sites
P40288

L

L

A

E

G

G

K

K

I

V

A

V

L
x
V

I
|
I

T
|
T

G
|
G

A
x
S

D
x
S

S
x
T

G
|
G

I
x
L

G
|
G

R
x
K

A
x
S

V
x
M

A
|
A

I
|
I

A
x
R

Y
x
F

A
|
A

R
x
T

E
|
E

G
x
K

A
|
A

D
x
K

V
|
V

A
x
V

I

V

A

N

Y

Y

L

R

N

S

E

K

H

E

D

D

D

E

A

A

Q

N

E

S

T

V

A

L

R

E

W

E

V

I

K

K

A

K

A

V

G

G

R

G

Q

E

C

A

L

I

L

A

L

V

P

K

G

G

D

D

L

V

A

T

Q

V

K

E

Q

S

H

D

C

V

H

I

D

N

I

L

V

V

D

Q

K

S

T

A

V

I

A

K

Q

E

F

F

G

G

R

K

I

L

D

D

I

V

L

M

V

I

N

N

A

A

A

G

F

L

Q
x
E

-

N

-

P

-

V

M

S

A

S

H

H

E

E

-

M

S

S

L

L

D

S

D
|
D

I

-

D

-

E

-

W

W

V

N

K

K

T
x
V

F

I

D

D

T

T

N

N

I

L

T

T

A

G

I

A

F

F

R

L

I

G

C

S

Q

R

R

E

A

A

L

I

P

K

S

Y

M

F

P

V

K
x
E

G

N

-

D

-

I

-

K

G

G

S

T

I

V

I

I

N

N

T

M

S

S

V

V

N

H

S

E

D

K

D

I

P

P

S

W

P

P

S

L

L

F

L

V

A

H

Y

Y

A

A

T

S

K

K

G

G

A

G

I

M

A

K

N

L

F

M

T

T

A

E

G

T

L

L

A

A

Q

L

L

E

L

Y

G

A

K

P

Q

K

G

G

I

I

R

R

V
|
V

N

N

S

N

V

I

A

G

P

P

G

G

P

A

I

I

W

N

T

T

P
|
P

L

I

I

N

P

A

A

E

T

K

M

F

P

A

D

D

-

P

E

E

A

Q

V

R

R

A

N

D

F

V

G
x
E

S

S

G

M

Y

I

P

P

M

M

G

G

R
x
Y

P

I

G

G

Q

E

P

P

V

E

E

E

V

I

A

A

P

A

I

V

Y

A

V

A

L

W

L

L

G

A

S

S

D

S

E

E

A

A

S

S

Y

Y

I

V

S

T

G

G

S

I

R

T

Y

L

A

F

V

A

T

D

G

G

11:35 (vs. 46:70, 44% identical) binding
E96 (≠ Q131) mutation E->A,G,K: Heat stable.
D108 (= D139) mutation to N: Heat stable.
V112 (≠ T148) mutation to A: Heat stable.
E133 (≠ K169) mutation to K: Heat stable.
V183 (= V216) mutation to I: Heat stable.
P194 (= P227) mutation to Q: Heat stable.
E210 (≠ G242) mutation to K: Heat stable.
Y217 (≠ R249) mutation to H: Heat stable.

Sites not aligning to the query:

252 Q→L: Heat stable.
253 Y→C: Heat stable.
258 A→G: Heat stable.

1g6kA Crystal structure of glucose dehydrogenase mutant e96a complexed with NAD+
34% identity, 85% coverage: 40:281/285 of query aligns to 5:249/261 of 1g6kA

query
sites
1g6kA

L

L

A

E

G

G

K

K

I

V

A

V

L

V

I

I

T

T

G

G

A

S

D

S

S
x
T

G
|
G

I
x
L

G

G

R

K

A

S

V

M

A

A

I

I

A

R

Y

F

A

A

R

T

E

E

G

K

A

A

D

K

V

V

A

V

I

V

A

N

Y

Y

L
x
R

N

S

E

K

H

E

D

D

D

E

A

A

Q

N

E

S

T

V

A

L

R

E

W

E

V

I

K

K

A

K

A

V

G

G

R

G

Q

E

C

A

L

I

L

A

L

V

P

K

G

G

D
|
D

L
x
V

A

T

Q

V

K

E

Q

S

H

D

C

V

H

I

D

N

I

L

V

V

D

Q

K

S

T

A

V

I

A

K

Q

E

F

F

G

G

R

K

I

L

D

D

I

V

L

M

V

I

N

N

N
|
N

A
|
A

A
x
G

F

L

Q

A

-

N

-

P

-

V

M

S

A

S

H

H

E

E

-

M

S

S

L

L

D

S

D

D

I

-

D

-

E

-

W

W

V

N

K

K

T

V

F

I

D

D

T

T

N

N

I

L

T

T

A

G

I

A

F

F

R

L

I

G

C

S

Q

R

R

E

A

A

L

I

P

K

S

Y

M

F

P

V

K

E

G

N

-

D

-

I

-

K

G

G

S

T

I

V

I

I

N

N

T
x
M

S

S

S
|
S

V

V

N

H

S

E

D

K

D

I

P

P

S

W

P

P

S

L

L

F

L

V

A

H

Y
|
Y

A

A

T

S

K
|
K

G

G

A

G

I

M

A

K

N

L

F

M

T

T

A

E

G

T

L

L

A

A

Q

L

L

E

L

Y

G

A

K

P

Q

K

G

G

I

I

R

R

V

V

N

N

S

N

V

I

A

G

P
|
P

G
|
G

P

A

I
|
I

W

N

T
|
T

P

P

L

I

I

N

P

A

A

E

T

K

M

F

P

A

D

D

-

P

E

E

A

Q

V

R

R

A

N

D

F

V

G

E

S

S

G

M

Y

I

P

P

M

M

G

G

R

Y

P

I

G

G

Q

E

P

P

V

E

E

E

V

I

A

A

P

A

I

V

Y

A

V

A

L

W

L

L

G

A

S

S

D

S

E

E

A

A

S

S

Y

Y

I

V

S

T

G

G

S

I

R

T

Y

L

A

F

V

A

T

D

G

G

active site: G18 (= G53), S145 (= S178), Y158 (= Y191), K162 (= K195)
binding nicotinamide-adenine-dinucleotide: T17 (≠ S52), G18 (= G53), L19 (≠ I54), R39 (≠ L74), D65 (= D100), V66 (≠ L101), N92 (= N127), A93 (= A128), G94 (≠ A129), M143 (≠ T176), S145 (= S178), Y158 (= Y191), P188 (= P221), G189 (= G222), I191 (= I224), T193 (= T226)

7v0hG Crystal structure of putative glucose 1-dehydrogenase from burkholderia cenocepacia in complex with NADP and a potential reaction product
34% identity, 86% coverage: 38:281/285 of query aligns to 7:251/253 of 7v0hG

query
sites
7v0hG

N

S

R

K

L

L

A

A

G

G

K

K

I

V

A

A

L

I

I

V

T

T

G
|
G

A

A

D
x
S

S
x
K

G
|
G

I
|
I

G

G

R

A

A

A

V

I

A

A

I

K

A

A

Y

L

A

A

R

D

E

E

G

G

A

A

D

A

V

V

A

V

I

V

A

N

Y

Y

L
x
A

N
x
S

E
x
S

H

K

D

A

D

G

A

A

Q

D

E

A

T

V

A

V

R

S

W

A

V

I

K

T

A

E

A

A

G

G

R

G

Q

R

C

A

L

V

L

A

L

V

P

G

G
|
G

D
|
D

L
x
V

A

S

Q

K

K

A

Q

A

H

D

C

A

H

Q

D

R

I

I

V

V

D

D

K

T

T

A

V

I

A

E

Q

T

F

Y

G

G

R

R

I

L

D

D

I

V

L

L

V

V

N

N

N
|
N

A
x
S

-
x
G

A

V

F
x
Y

Q

E

M

F

A

A

H

-

E

-

S

P

L

I

D

E

D

A

I

I

D

T

D

E

E

H

W

Y

V

R

K

R

T

Q

F

F

D

D

T

T

N

N

I

V

T

F

A

G

I

V

F

L

R

L

I

T

C

T

Q

Q

R

A

A

A

L

V

P

K

S

H

M

L

P

G

K

E

G

G

G

A

S

S

I

I

N

N

T
x
I

S

S

S
|
S

V

V

N

V

S

T

D

S

D

I

P

T

S

P

P

P

S

A

L

S

L

A

A

V

Y
|
Y

A

S

A

G

T

T

K
|
K

G

G

A

A

I

V

A

D

N

A

F

I

T

T

A

G

G

V

L

L

A

A

Q

L

L

E

L

L

G

G

K

P

Q

R

G

K

I

I

R

R

V

V

N

N

S

A

V

I

A

N

P
|
P

G
|
G

P
x
M

I
|
I

W

V

T
|
T

P

E

-
x
G

-
x
T

-

H

-

S

-

A

-

G

L
x
I

I

I

P

G

A

S

T

D

M

L

P

E

D

A

E

Q

A

V

V

L

R

G

N

Q

F

-

G

-

S

-

G

-

Y

T

P

P

M

L

G

G

R

R

P

L

G

G

Q

E

P

P

V

N

E

D

V

I

A

A

P

S

I

V

Y

A

V

V

L

F

L

L

G

A

S

S

D

D

E

D

A

A

S

R

Y

W

I

M

S

T

G

G

S

E

R

H

Y

L

A

V

V

V

T

S

G

G

binding nadp nicotinamide-adenine-dinucleotide phosphate: G18 (= G49), S20 (≠ D51), K21 (≠ S52), G22 (= G53), I23 (= I54), A43 (≠ L74), S44 (≠ N75), S45 (≠ E76), G68 (= G99), D69 (= D100), V70 (≠ L101), N96 (= N127), S97 (≠ A128), G98 (vs. gap), Y100 (≠ F130), I144 (≠ T176), S146 (= S178), Y159 (= Y191), K163 (= K195), P189 (= P221), G190 (= G222), M191 (≠ P223), I192 (= I224), T194 (= T226), G196 (vs. gap), T197 (vs. gap)
binding (2R)-2-(hydroxymethyl)pentanedioic acid: S146 (= S178), Y159 (= Y191), M191 (≠ P223), I202 (≠ L228)

3osuA Crystal structure of the 3-oxoacyl-acyl carrier protein reductase, fabg, from staphylococcus aureus
35% identity, 84% coverage: 43:281/285 of query aligns to 5:243/246 of 3osuA

query
sites
3osuA

K

K

I

S

A

A

L

L

I

V

T

T

G

G

A

A

D

S

S

R

G
|
G

I

I

G

G

R

R

A

S

V

I

A

A

I

L

A

Q

Y

L

A

A

R

E

E

E

G

G

A

Y

D

N

V

V

A

A

I

V

A

N

Y

Y

L

A

N

G

E

S

H

K

D

E

D

K

A

A

Q

E

E

A

T

V

A

V

R

E

W

E

V

I

K

K

A

A

A

K

G

G

R

V

Q

D

C

S

L

F

L

A

L

I

P

Q

G

A

D

N

L

V

A

A

Q

D

K

A

Q

D

H

E

C

V

H

K

D

A

I

M

V

I

D

K

K

E

T

V

V

V

A

S

Q

Q

F

F

G

G

R

S

I

L

D

D

I

V

L

L

V

V

N

N

N
|
N

A

A

A

G

F

I

Q

T

M

R

A

-

H

D

E

N

S

L

L

L

D

M

D

R

I

M

D

K

D

E

D

Q

E

E

W

W

V

D

K

D

T

V

F

I

D

D

T

T

N

N

I

L

T

K

A

G

I

V

F

F

R

N

I

C

C

I

Q

Q

R

K

A

A

L

T

P

P

S

Q

M

M

-

L

-

R

P

Q

K

R

G

S

G

G

S

A

I

I

N

N

T

L

S

S

S
|
S

V

V

N

V

S

G

D

A

D

V

P

G

S

N

P

P

S

G

L
x
Q

L

A

A

N

Y
|
Y

A

V

A

A

T

T

K
|
K

G

A

A

G

I

V

A

I

N

G

F

L

T

T

A

K

G

S

L

A

A

A

Q

R

L

E

L

L

G

A

K

S

Q

R

G

G

I

I

R

T

V

V

N

N

S

A

V

V

A

A

P

P

G

G

P

F

I

I

W

V

T

S

P

D

L

M

I

T

P

D

A

A

T

-

M

L

P

S

D

D

E

E

A

L

V

K

R

E

N

Q

F

M

G

L

S

T

G

Q

Y

I

P

P

M

L

G

A

R

R

P

F

G

G

Q

Q

P

D

V

T

E

D

V

I

A

A

P

N

I

T

Y

V

V

A

L

F

L

L

G

A

S

S

D

D

E

K

A

A

S

K

Y

Y

I

I

S

T

G

G

S

Q

R

T

Y

I

A

H

V

V

T

N

G

G

active site: G15 (= G53), S141 (= S178), Q151 (≠ L188), Y154 (= Y191), K158 (= K195)
binding magnesium ion: N89 (= N127), K158 (= K195)

8bcjB Crystal structure of short-chain dehydrogenase pa3128 from pseudomonas aeruginosa pao1 in complex with NADP+
36% identity, 84% coverage: 44:282/285 of query aligns to 6:250/250 of 8bcjB

query
sites
8bcjB

I

V

A

M

L

L

I

I

T

T

G
|
G

A

A

D
x
S

S
x
R

G
|
G

I
|
I

G

G

R

A

A

A

V

T

A

A

I

L

A

L

Y

A

A

A

R

E

E

R

G

G

A

Y

D

A

V

V

A

V

I

L

A

N

Y

Y

L
|
L

N
x
R

E
x
N

H

R

D

E

D

A

A

A

Q

E

E

A

T

L

A

R

R

Q

W

R

V

I

K

E

A

R

A

Q

G

G

R

G

Q

E

C

A

L

L

L

A

L

V

P

A

G
x
A

D
|
D

L
x
V

A

A

Q

E

K

E

Q

G

H

D

C

V

H

E

D

R

I

L

V

F

D

A

K

S

T

I

V

D

A

E

Q

R

F

F

G

G

R

R

I

L

D

D

I

V

L

L

V

V

N

N

N
|
N

A
|
A

A
x
G

F

M

Q

L

M

E

A

A

H

Q

E

T

S

R

L

L

D

E

D

N

I

I

D

D

D

A

E

R

W

L

V

H

K

R

T

V

F

F

D

A

T
|
T

N

N

I

V

T

T

A

G

I

S

F

F

R

L

I

C

C

A

Q

R

R

E

A

A

L

V

P

K

S

R

M

L

P

S

-

T

-

R

-

H

-

G

K

R

G

G

S

S

I

I

I

V

N

N

T
x
V

S

S

S
|
S

V

M

N

A

S

S

D

R

D

L

P

G

S

S

P

P

S

N

-

E

L

Y

L

I

A

D

Y
|
Y

A

A

T

A

K
|
K

G

G

A

A

I

I

A

D

N

S

F

M

T

T

A

I

G

G

L

L

A

A

Q

R

L

E

L

V

G

A

K

A

Q

E

G

G

I

I

R

R

V

V

N

N

S

A

V

V

A

R

P
|
P

G
|
G

P

L

I
|
I

W

D

T
|
T

P

E

L
x
I

I
x
H

P

A

A

S

T

G

M

G

P

E

D

P

E

G

A

R

V

I

R

E

N

R

F

L

G

K

S

G

G

G

Y

I

P

P

M

L

G

G

R

R

P

G

G

G

Q

T

P

A

V

E

E

E

V

V

A

A

P

R

I

A

Y

I

V

L

L

W

L

L

G

A

S

S

D

D

E

E

A

A

S

S

Y

Y

I

S

S

T

G

G

S

T

R

F

Y

I

A

D

V

V

T

S

G

G

K

R

binding nadp nicotinamide-adenine-dinucleotide phosphate: G11 (= G49), S13 (≠ D51), R14 (≠ S52), G15 (= G53), I16 (= I54), L36 (= L74), R37 (≠ N75), N38 (≠ E76), A61 (≠ G99), D62 (= D100), V63 (≠ L101), N89 (= N127), A90 (= A128), G91 (≠ A129), T113 (= T151), V143 (≠ T176), S145 (= S178), Y159 (= Y191), K163 (= K195), P189 (= P221), G190 (= G222), I192 (= I224), T194 (= T226), I196 (≠ L228), H197 (≠ I229)

3sj7A Structure of beta-ketoacetyl-coa reductase (fabg) from staphylococcus aureus complex with NADPH (see paper)
35% identity, 84% coverage: 43:281/285 of query aligns to 2:236/239 of 3sj7A

query
sites
3sj7A

K

K

I

S

A

A

L

L

I

V

T

T

G
|
G

A

A

D
x
S

S
x
R

G
|
G

I
|
I

G

G

R

R

A

S

V

I

A

A

I

L

A

Q

Y

L

A

A

R

E

E

E

G

G

A

Y

D

N

V

V

A

A

I

V

A
x
N

Y
|
Y

L
x
A

N
x
G

E
x
S

H

K

D

E

D

K

A

A

Q

E

E

A

T

V

A

V

R

E

W

E

V

I

K

K

A

A

A

K

G

G

R

V

Q

D

C

S

L

F

L

A

L

I

P

Q

G
x
A

D
x
N

L
x
V

A

A

Q

D

K

A

Q

D

H

E

C

V

H

K

D

A

I

M

V

I

D

K

K

E

T

V

V

V

A

S

Q

Q

F

F

G

G

R

S

I

L

D

D

I

V

L

L

V

V

N

N

N
|
N

A
|
A

A

G

F

I

Q

T

M

R

A

-

H

D

E

N

S

L

L

L

D

M

D

R

I

M

D

K

D

E

D

Q

E

E

W

W

V

D

K

D

T

V

F

I

D

D

T
|
T

N

N

I

L

T

K

A

G

I

V

F

F

R

N

I

C

C

I

Q

Q

R

K

A

A

L

T

P

P

S

Q

M

M

-

L

-

R

P

Q

K

R

G

S

G

G

S

A

I

I

N

N

T

L

S

S

S
|
S

V

V

N

V

S

G

D

A

D

V

P

G

S

N

P

P

S

G

L
x
Q

L

A

A

N

Y
|
Y

A

V

A

A

T

T

K
|
K

G

A

A

G

I

V

A

I

N

G

F

L

T

T

A

K

G

S

L

A

A

A

Q

R

L

E

L

L

G

A

K

S

Q

R

G

G

I

I

R

T

V

V

N

N

S

A

V

V

A

A

P
|
P

G
|
G

P

-

I

-

W

-

T

-

P

-

L

F

I

I

P

V

A

S

T

D

M

M

P

T

D

D

E

E

A

L

V

K

R

E

N

Q

F

M

G

L

S

T

G

Q

Y

I

P

P

M

L

G

A

R

R

P

F

G

G

Q

Q

P

D

V

T

E

D

V

I

A

A

P

N

I

T

Y

V

V

A

L

F

L

L

G

A

S

S

D

D

E

K

A

A

S

K

Y

Y

I

I

S

T

G

G

S

Q

R

T

Y

I

A

H

V

V

T

N

G

G

active site: G12 (= G53), S138 (= S178), Q148 (≠ L188), Y151 (= Y191), K155 (= K195)
binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: G8 (= G49), S10 (≠ D51), R11 (≠ S52), I13 (= I54), N31 (≠ A72), Y32 (= Y73), A33 (≠ L74), G34 (≠ N75), S35 (≠ E76), A58 (≠ G99), N59 (≠ D100), V60 (≠ L101), N86 (= N127), A87 (= A128), T109 (= T151), S138 (= S178), Y151 (= Y191), K155 (= K195), P181 (= P221), G182 (= G222)

4nbuB Crystal structure of fabg from bacillus sp (see paper)
34% identity, 86% coverage: 38:281/285 of query aligns to 3:241/244 of 4nbuB

query
sites
4nbuB

N

S

R

R

L

L

A

Q

G

D

K

K

I

V

A

A

L

I

I

I

T

T

G
|
G

A

A

D

A

S
x
N

G
|
G

I
|
I

G

G

R

L

A

E

V

A

A

A

I

R

A

V

Y

F

A

M

R

K

E

E

G

G

A

A

D

K

V

V

A

V

I

I

A

A

Y
x
D

L
x
F

N

N

E

E

H

-

D

-

A

-

Q

-

E

-

T

-

A

-

R

-

W

-

V

-

K

-

A

A

G

G

R

K

Q

E

-

A

-

V

-

E

-

A

-

N

-

P

-

G

C

V

L

V

L

F

L

I

P

R

G
x
V

D
|
D

L
x
V

A

S

Q

D

K

R

Q

E

H

S

C

V

H

H

D

R

I

L

V

V

D

E

K

N

T

V

V

A

A

E

Q

R

F

F

G

G

R

K

I

I

D

D

I

I

L

L

V

I

N

N

N
|
N

A
|
A

A
x
G

F
x
I

Q

T

M

-

A

R

H
x
D

E

S

S

M

L

L

D

S

D
x
K

I

M

D

T

D

V

D

D

E

Q

W

F

V

Q

K

Q

T

V

F

I

D

N

T

V

N
|
N

I

L

T

T

A

G

I

V

F

F

R

H

I

C

C

T

Q

Q

R

A

A

V

L

L

P

P

S

Y

M

M

P

A

K

E

-

Q

-

G

G

K

G

G

S

K

I

I

N

N

T
|
T

S

S

S
|
S

V

V

N

T

S

G

D

T

D

Y

P

G

S
x
N

P
x
V

S

G

L
x
Q

L

T

A

N

Y
|
Y

A

A

T

A

K
|
K

G

A

A

G

I

V

A

I

N

G

F

M

T

T

A

K

G

T

L

W

A

A

Q

K

L

E

L

L

G

A

K

R

Q

K

G

G

I

I

R

N

V

V

N

N

S

A

V

V

A

A

P
|
P

G

G

P
x
F

I
x
T

W

E

T
|
T

P

A

L
x
M

I

V

P

-

A

A

T

E

M

V

P

P

D

E

E

K

A

V

V

I

R

E

N
x
K

F

M

G

K

S

A

G

Q

Y

V

P

P

M

M

G

G

R

R

P

L

G

G

Q

K

P

P

V

E

E

D

V

I

A

A

P

N

I

A

Y

Y

V

L

L

F

L

L

G

A

S

S

D

H

E

E

A

S

S

D

Y

Y

I

V

S

N

G

G

S

H

R

V

Y

L

A

H

V

V

T

D

G

G

active site: G18 (= G53), N111 (= N152), S139 (= S178), Q149 (≠ L188), Y152 (= Y191), K156 (= K195)
binding acetoacetyl-coenzyme a: D93 (≠ H134), K98 (≠ D139), S139 (= S178), N146 (≠ S185), V147 (≠ P186), Q149 (≠ L188), Y152 (= Y191), F184 (≠ P223), M189 (≠ L228), K200 (≠ N240)
binding 1,4-dihydronicotinamide adenine dinucleotide: G14 (= G49), N17 (≠ S52), G18 (= G53), I19 (= I54), D38 (≠ Y73), F39 (≠ L74), V59 (≠ G99), D60 (= D100), V61 (≠ L101), N87 (= N127), A88 (= A128), G89 (≠ A129), I90 (≠ F130), T137 (= T176), S139 (= S178), Y152 (= Y191), K156 (= K195), P182 (= P221), F184 (≠ P223), T185 (≠ I224), T187 (= T226), M189 (≠ L228)

4iqgD Crystal structure of bpro0239 oxidoreductase from polaromonas sp. Js666 in NADP bound form
38% identity, 84% coverage: 43:282/285 of query aligns to 3:248/248 of 4iqgD

query
sites
4iqgD

K

K

I

V

A

V

L

L

I

I

T

T

G
|
G

A

G

D
x
S

S
x
R

G
|
G

I
|
I

G

G

R

A

A

A

V

S

A

A

I

L

A

L

Y

A

A

A

R

R

E

Q

G

G

A

Y

D

A

V

V

A

A

I

V

A
x
N

Y

Y

L
x
A

N
x
S

E
x
N

H

S

D

A

A

A

Q

D

E

E

T

V

A

V

R

R

W

Q

V

I

K

R

A

E

A

A

G

G

R

G

Q

Q

C

A

L

L

L

A

L

V

P

Q

G
x
A

D
|
D

L
x
V

A

A

Q

K

K

E

Q

R

H

E

C

V

H

L

D

A

I

M

V

F

D

E

K

T

T

V

V

D

A

A

Q

Q

F

L

G

G

R

R

I

L

D

S

I

A

L

L

V

V

N

N

N
|
N

A
|
A

A
x
G

F

V

Q

V

M

D

A

Q

H

T

E

T

S

R

L

V

D

D

D

G

I

I

D

T

D

L

D

E

E

R

W

L

V

Q

K

R

T

M

F

F

D

E

T

I

N
|
N

I

V

T

F

A

G

I

S

F

F

R

L

I

C

C

A

Q

R

R

E

A

A

L

V

P

K

S

R

M

M

P

S

-

T

-

R

-

Y

-

G

K

S

G

G

S

S

I

I

I

V

N

N

T
x
V

S

S

S
|
S

V

A

N

A

S

A

D

R

D

L

P

G

S

S

P

P

-

G

S

Q

L
x
Y

L

V

A

D

Y
|
Y

A

A

T

A

K
|
K

G

G

A

A

I

I

A

D

N

T

F

F

T

T

A

L

G

G

L

L

A

A

Q

K

L

E

L

V

G

A

K

T

Q

E

G

G

I

I

R

R

V

V

N

N

S

A

V

V

A

R

P
|
P

G
|
G

P

I

I
|
I

W

E

T
|
T

P

D

L
x
I

-
x
H

I

A

P

S

A

G

T

G

M

L

P

P

D

N

E

R

A

A

V

-

R

R

N

D

F

V

G

A

S

P

G

Q

Y

V

P

P

M

M

G

Q

R

R

P

A

G

G

Q

T

P

A

V

R

E

E

V

V

A

A

P

E

I

A

Y

I

V

V

L

W

L

L

G

L

S

G

D

D

E

Q

A

A

S

S

Y

Y

I

T

S

T

G

G

S

A

R

L

Y

L

A

D

V

V

T

T

G

G

K

R

active site: G13 (= G53), N112 (= N152), S143 (= S178), Y154 (≠ L188), Y157 (= Y191), K161 (= K195)
binding nadp nicotinamide-adenine-dinucleotide phosphate: G9 (= G49), S11 (≠ D51), R12 (≠ S52), G13 (= G53), I14 (= I54), N32 (≠ A72), A34 (≠ L74), S35 (≠ N75), N36 (≠ E76), A59 (≠ G99), D60 (= D100), V61 (≠ L101), N87 (= N127), A88 (= A128), G89 (≠ A129), V141 (≠ T176), S143 (= S178), Y157 (= Y191), K161 (= K195), P187 (= P221), G188 (= G222), I190 (= I224), T192 (= T226), I194 (≠ L228), H195 (vs. gap)

8cxaA Crystal structure of 3-oxoacyl-[acyl-carrier-protein] reductase from mycobacterium smegmatis with bound NAD
36% identity, 85% coverage: 39:281/285 of query aligns to 2:247/251 of 8cxaA

query
sites
8cxaA

R

R

L

L

A

A

G

N

K

R

I

V

A

A

L

I

I

I

T

T

G
|
G

A

A

D

A

S
x
Q

G
|
G

I
|
I

G

G

R

R

A

I

V

Y

A

A

I

E

A

R

Y

F

A

A

R

E

E

E

G

G

A

A

D

A

V

V

A

V

I

V

A

A

Y
x
D

L

I

N

N

E

E

H

-

D

P

D

K

A

A

Q

T

E

E

T

V

A

A

R

S

W

S

V

I

K

T

A

S

A

L

G

G

R

G

Q

R

C

A

L

I

L

A

P

A

G

V

D

D

L
x
V

A

S

Q

D

K

V

Q

E

H

S

C

V

H

N

D

R

I

M

V

V

D

D

K

S

T

A

V

V

A

E

Q

A

F

F

G

G

R

T

I

V

D

D

I

I

L

L

V

V

N

N

N
|
N

A

A

A
|
A

F

I

-

F

-
x
S

Q

T

M

L

A

K

H

M

E

K

S

P

L

F

D

E

I

I

D

S

D

G

D

D

E

E

W

W

V

D

K

K

T

L

F

F

D

A

T

V

N

N

I

A

T

K

A

G

I

T

F

F

R

L

I

C

C

C

Q

Q

R

A

A

V

L

S

P

P

S

V

M

M

P

R

K

K

G

N

-

Q

-

Y

G

G

S

R

I

I

N

N

T
x
I

S
|
S

V

S

N

V

S

V

D

V

D

T

P

G

S

R

P

P

S

N

L

Y

L

A

A

H

Y
|
Y

A

I

A

A

T

S

K
|
K

G

G

A

A

I

V

A

W

N

A

F

L

T

T

A

H

G

A

L

L

A

A

Q

T

L

E

L

M

G

G

K

T

Q

D

G

G

I

I

R

T

V

V

N

N

S

T

V

V

A

S

P
|
P

G
x
H

P

G

I
|
I

W

I

T

T

P

E

L
x
I

I

P

P

R

A

E

T

T

M

I

P

S

D

E

E

E

A

G

V

W

R

R

N

R

F

N

G

L

S

E

G

E

Y

Q

P

A

M

L

G

K

R

R

P

K

G

G

Q

D

P

A

V

S

E

D

V

L

A

V

P

G

I

I

Y

L

V

L

L

Y

L

L

G

A

S

S

D

D

E

E

A

S

S

K

Y

F

I

M

S

T

G

G

S

Q

R

T

Y

V

A

A

V

L

T

D

G

A

G

G

binding nicotinamide-adenine-dinucleotide: G12 (= G49), Q15 (≠ S52), G16 (= G53), I17 (= I54), D36 (≠ Y73), V63 (≠ L101), N89 (= N127), A91 (= A129), S94 (vs. gap), I142 (≠ T176), S143 (= S177), S144 (= S178), Y157 (= Y191), K161 (= K195), P187 (= P221), H188 (≠ G222), I190 (= I224), I194 (≠ L228)

4wecA Crystal structure of a short chain dehydrogenase from mycobacterium smegmatis
36% identity, 86% coverage: 37:281/285 of query aligns to 5:249/258 of 4wecA

query
sites
4wecA

N

T

N

Q

R

R

L

L

A

A

G

G

K

K

I

V

A

A

L

V

I

I

T

T

G
|
G

A

G

D
x
A

S
|
S

G
|
G

I
|
I

G

G

R

L

A

A

V

T

A

G

I

R

A

R

Y

L

A

R

R

A

E

E

G

G

A

A

D

T

V

V

A

V

I

V

A

G

Y

-

L

-

N

-

E

-

H

-

D

-

D
|
D

A
x
I

Q

D

E

P

T

T

A

T

R

G

W

K

V

A

K

A

A

A

A

D

G

E

R

L

Q

E

C

G

L

L

L

F

L

V

P

P

G
x
V

D
|
D

L
x
V

A

S

Q

E

K

Q

Q

E

H

A

C

V

H

D

D

N

I

L

V

F

D

D

K

T

T

A

V

A

A

S

Q

T

F

F

G

G

R

R

I

V

D

D

I

I

L

A

V

F

N

N

N
|
N

A

A

A

G

F

I

Q

S

M

P

A

P

H

E

E

D

S

D

L

L

-

I

D

E

D

N

I

T

D

D

D

L

D

P

E

A

W

W

V

Q

K

R

T

V

F

Q

D

D

T

I

N

N

I

L

T

K

A

S

I

V

F

Y

R

L

I

S

C

C

Q

R

R

A

A

A

L

L

P

R

S

H

M

M

-

V

P

P

K

A

G

G

-

K

G

G

S

S

I

I

N

N

T
|
T

S

A

S
|
S

-

F

V

V

N

A

S

V

D

M

D

G

P

S

S

A

P

T

S

S

L
x
Q

L

I

A

S

Y
|
Y

A

T

A

A

T

S

K
|
K

G

G

A

G

I

V

A

L

N

A

F

M

T

S

A

R

G

E

L

L

A

G

Q

V

L

Q

L

Y

G

A

K

R

Q

Q

G

G

I

I

R

R

V

V

N

N

S

A

V

L

A

C

P
|
P

G

G

P
|
P

I
x
V

W

N

T

T

P

P

L

L

I

L

P

Q

-

E

-

L

-

F

A

A

T

K

M

D

P

P

D

E

E

R

A

A

V

A

R

R

N

R

F

L

G

-

S

V

G

H

Y

I

P

P

M

L

G

G

R

R

P

F

G

A

Q

E

P

P

V

E

E

E

V

L

A

A

P

A

I

A

Y

V

V

A

L

F

L

L

G

A

S

S

D

D

E

D

A

A

S

S

Y

F

I

I

S

T

G

G

S

S

R

T

Y

F

A

L

V

V

T

D

G

G

active site: G21 (= G53), S143 (= S178), Q154 (≠ L188), Y157 (= Y191), K161 (= K195)
binding nicotinamide-adenine-dinucleotide: G17 (= G49), A19 (≠ D51), S20 (= S52), G21 (= G53), I22 (= I54), D41 (= D79), I42 (≠ A80), V61 (≠ G99), D62 (= D100), V63 (≠ L101), N89 (= N127), T141 (= T176), Y157 (= Y191), K161 (= K195), P187 (= P221), P189 (= P223), V190 (≠ I224)

6t77A Crystal structure of klebsiella pneumoniae fabg(NADPH-dependent) NADP- complex at 1.75 a resolution (see paper)
36% identity, 84% coverage: 42:281/285 of query aligns to 5:240/244 of 6t77A

query
sites
6t77A

G

G

K

K

I

I

A

A

L

L

I

V

T

T

G
|
G

A

A

D
x
S

S
x
R

G
|
G

I

I

G

G

R

R

A

A

V

I

A

A

I

E

A

T

Y

L

A

V

R

A

E

R

G

G

A

A

D

K

V

V

A

-

I

I

A

G

Y

T

L

A

N
x
T

E

S

H

E

D

S

D

G

A

A

Q

Q

E

A

T

I

A

S

R

D

W

Y

V

L

K

G

A

A

A

N

G

G

R

K

Q

G

C

L

L

M

L
|
L

L

-

P

-

G

-

D
x
N

L
x
V

A

T

Q

D

K

P

Q

A

H

S

C

I

H

E

D

S

I

V

V

L

D

E

K

N

T

V

V

R

A

A

Q

E

F

F

G

G

R

E

I

V

D

D

I

I

L

L

V

V

N

N

A
|
A

A
x
G

F
x
I

Q

T

M

R

A

-

H

D

E

N

S

L

L

L

D

M

D

R

I

M

D

K

D

D

E

E

W

W

V

N

K

D

T

I

F

I

D

E

T

T

N

N

I

L

T

S

A

S

I

V

F

F

R

R

I

L

C

S

Q

K

R

A

A

V

L

M

P

R

S

A

M

M

P

M

K

K

G

K

-

R

-

H

G

G

S

R

I

I

N

T

T

I

S

G

S
|
S

V

V

N

V

S

G

D

T

D

M

P

G

S

N

P

A

S

G

L

Q

L

A

A

N

Y
|
Y

A

A

T

A

K

K

G

A

A

G

I

L

A

I

N

G

F

F

T

S

A

K

G

S

L

L

A

A

Q

R

L

E

L

V

G

A

K

S

Q

R

G

G

I

I

R

T

V

V

N

N

S

V

V

V

A

A

P

P

G

G

P

F

I

I

W

E

T

T

P

D

L

M

I

T

P

R

A

A

T

-

M

L

P

T

D

D

E

E

A

Q

V

R

R

A

N

G

F

T

G

L

S

A

G

A

Y

V

P

P

M

A

G

G

R

R

P

L

G

G

Q

T

P

P

V

N

E

E

V

I

A

A

P

S

I

A

Y

V

V

A

L

F

L

L

G

A

S

S

D

D

E

E

A

A

S

S

Y

Y

I

I

S

T

G

G

S

E

R

T

Y

L

A

H

V

V

T

N

G

G

active site: G16 (= G53), S138 (= S178), Y151 (= Y191)
binding nadp nicotinamide-adenine-dinucleotide phosphate: G12 (= G49), S14 (≠ D51), R15 (≠ S52), T37 (≠ N75), L58 (= L96), N59 (≠ D100), V60 (≠ L101), A87 (= A128), G88 (≠ A129), I89 (≠ F130)

7emgB Carbonyl reductase variant 4 (r123c/l209p/f183y/v61k) from serratia marcescens complexed with NADP+ (see paper)
36% identity, 86% coverage: 42:285/285 of query aligns to 4:243/243 of 7emgB

query
sites
7emgB

G

G

K

K

I

I

A

V

L

L

I

V

T

T

G
|
G

A

A

D
x
S

S
x
R

G

G

I

I

G

G

R

R

A

A

V

I

A

A

I

E

A

T

Y

F

A

V

R

A

E

R

G

G

A

A

D

K

V

V

A

-

I

I

A

G

Y

T

L

A

N
x
T

E

S

H

E

D

S

D

G

A

A

Q

E

E

A

T

I

A

S

R

G

W

Y

V

L

K

G

A

A

A

N

G

G

R

K

Q

G

C

F

L

M

L

L

L

-

P

-

G

-

D
x
N

L
x
V

A

K

Q

D

K

A

Q

Q

H

S

C

I

H

D

D

S

I

V

V

L

D

A

K

S

T

I

V

R

A

A

Q

E

F

F

G

G

R

E

I

I

D

D

I

I

L

L

V

V

N

N

A

A

A

G

F
x
I

Q

T

M

R

A

-

H

D

E

N

S

L

L

L

D

M

D

R

I

M

D

K

D

D

E

E

W

W

V

E

K

D

T

I

F

L

D

D

T

T

N

N

I

L

T

T

A

S

I

V

F

F

R

R

I

L

C

S

Q

K

R

A

A

V

L

M

P

C

S

A

M

M

P

M

K

K

G

K

-

R

-

F

G

G

S

R

I

I

N

T

T

I

S

G

S

S

V

V

N

V

S

G

D

T

D

M

P

G

S

N

P

A

S

G

L

Q

L

A

A

N

Y

Y

A

A

T

A

K

K

G

A

A

G

I

L

A

I

N

G

F

F

T

S

A

K

G

S

L

L

A

A

Q

R

L

E

L

V

G

A

K

S

Q

R

G

G

I

I

R

T

V

V

N

N

S

V

V

V

A

A

P

P

G

G

P

Y

I

I

W

E

T

T

P

D

L

M

I

T

P

R

A

A

T

-

M

L

P

T

D

D

E

D

A

Q

V

R

R

A

N

G

F

I

G

L

S

S

G

S

Y

V

P

P

M

A

G

N

R

R

P

P

G

G

Q

D

P

A

V

K

E

E

V

I

A

A

P

S

I

A

Y

V

V

A

L

F

L

L

G

A

S

S

D

D

E

E

A

A

S

G

Y

Y

I

I

S

T

G

G

S

E

R

T

Y

L

A

H

V

V

T

N

G

G

K

M

P

Y

I

M

L

I

binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: G11 (= G49), S13 (≠ D51), R14 (≠ S52), T36 (≠ N75), N58 (≠ D100), V59 (≠ L101), I88 (≠ F130)

6oz7A Putative oxidoreductase from escherichia coli str. K-12
36% identity, 84% coverage: 43:281/285 of query aligns to 2:231/242 of 6oz7A

query
sites
6oz7A

K

Q

I

V

A

A

L

I

I

I

T

T

G

A

A

S

D

D

S

S

G
|
G

I

I

G

G

R

K

A

E

V

C

A

A

I

L

A

L

Y

L

A

A

R

Q

E

Q

G

G

A

F

D

D

V

I

A

G

I

I

A

T

Y

W

L

H

N

S

E

D

H

E

D

E

D

G

A

A

Q

K

E
x
D

T

T

A

A

R

R

W
x
E

V

V

K

V

A

S

A

H

G

G

R

V

Q

R

C

A

L

E

L

I

L

V

P

Q

G

L

D

D

L

L

A

G

Q

N

K

L

Q

P

H

E

C

G

H

A

D

L

I

A

V

L

D

E

K

K

T

L

V

I

A

Q

Q

R

F

L

G

G

R

R

I

I

D

D

I

V

L

L

V

V

N

N

A

A

A

G

F

-

Q

A

M

M

A

T

H

K

E

A

S

P

L

F

D

L

D

D

I

M

D

A

D

F

D

D

E

E

W

W

V

R

K

K

T

I

F

F

D

T

T

V

N

D

I

V

T

D

A

G

I

A

F

F

R

L

I

C

C

S

Q

Q

R

I

A

A

L

A

P

R

S

Q

M

M

P

V

K

K

-

Q

-

G

-

Q

G

G

S

R

I

I

N

N

T

I

S

T

S
|
S

V

V

N

H

S

E

D

H

D

T

P

P

S

L

P

P

S

D

L

A

L

S

A

A

Y
|
Y

A

T

A

A

T

A

K

K

G

H

A

A

I

L

A

G

N

G

F

L

T

T

A

K

G

A

L

M

A

A

Q

L

L

E

L

L

G

V

K

R

Q

H

G

K

I

I

R

L

V

V

N

N

S

A

V

V

A

A

P

P

G

G

P

A

I

I

W

A

T

T

P

P

L

-

I

-

P

P

A

D

T

A

M

E

P

P

D

S

E

I

A

P

V

L

R

R

N

R

F

F

G

G

S

A

G

T

Y

H

P

-

M

-

G

-

R

-

P

-

G

-

Q

-

P

-

V

-

E

E

V

I

A

A

P

S

I

L

Y

V

V

V

L

W

L

L

G

C

S

S

D

E

E

G

A

A

S

N

Y

Y

I

T

S

T

G

G

S

Q

R

S

Y

L

A

I

V

V

T

D

G

G

active site: G12 (= G53), S139 (= S178), Y152 (= Y191)
binding calcium ion: D41 (≠ E82), E45 (≠ W86)

Query Sequence

>PP_2723 FitnessBrowser__Putida:PP_2723
MSDYPTPPFPSQPQSVPGSQRKMDPYPDCGEQSYTGNNRLAGKIALITGADSGIGRAVAI
AYAREGADVAIAYLNEHDDAQETARWVKAAGRQCLLLPGDLAQKQHCHDIVDKTVAQFGR
IDILVNNAAFQMAHESLDDIDDDEWVKTFDTNITAIFRICQRALPSMPKGGSIINTSSVN
SDDPSPSLLAYAATKGAIANFTAGLAQLLGKQGIRVNSVAPGPIWTPLIPATMPDEAVRN
FGSGYPMGRPGQPVEVAPIYVLLGSDEASYISGSRYAVTGGKPIL

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory