Comparing PP_3666 FitnessBrowser__Putida:PP_3666 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 2 hits to proteins with known functional sites (download)
Q8NLB7 Gentisate transporter from Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318 / LMG 3730 / NCIMB 10025) (see paper)
23% identity, 55% coverage: 39:283/444 of query aligns to 56:281/444 of Q8NLB7
Sites not aligning to the query:
Q5EXK5 3-hydroxybenzoate transporter MhbT from Klebsiella oxytoca (see paper)
22% identity, 82% coverage: 29:393/444 of query aligns to 26:390/452 of Q5EXK5
>PP_3666 FitnessBrowser__Putida:PP_3666
MSSTTLDPSAIAGPAHNAERQALRKAARASFMGNFVEWFDYAAYGYLATIIAATFFPQTD
KTTGLLATFAVFALSFLVRPLGGIVWGHFGDRHGRRNALSWSILIMSVSTFCIGLLPGYA
QIGLWAPALLLLIRLVQGFSASGEYAGAAAFLAEYAPPGRRGLYTSIVPASTAAGLLFGA
AFVAVLHELLSSEALHEWGWRLPFLLAAPFGLVGRYIRMSLQDTPKFLEMEQRLETKAGM
ATTPLRELLGQHRRSLAIGMGVTCLNAVAFYLLLSYMPTYLSSEMGMSERDSFIASTVSL
ATYIGLIFLMGRLSDQFGRKTMLVVASLLFLGLTVPLFRLLDGQPLLVILAIQILFGAML
AMNDGTLPCLLAEIFPTRVRFSGFALSFNVANALFGGTAPFIATWLIQVTGSKLAPAGYL
LAAALVALVAMLMCRETAHAALED
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory