SitesBLAST – Find functional sites

 

SitesBLAST

Comparing Pf1N1B4_1226 FitnessBrowser__pseudo1_N1B4:Pf1N1B4_1226 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 20 (the maximum) hits to proteins with known functional sites (download)

4isxA The crystal structure of maltose o-acetyltransferase from clostridium difficile 630 in complex with acetyl-coa
33% identity, 28% coverage: 33:124/323 of query aligns to 74:182/186 of 4isxA

query
sites
4isxA
N
 
N
V
 
I
Q
 
H
L
 
V
G
 
G
D
 
E
D
 
N
C
 
F
F
 
F
V
 
A
G
x
N
F
 
Y
K
 
D
S
 
C
-
 
I
-
 
F
-
 
L
D
 
D
L
 
V
R
 
C
F
 
K
V
 
I
A
 
E
I
 
I
G
 
G
K
 
D
A
 
N
S
 
V
M
 
M
L
 
L
A
|
A
T
 
P
G
 
N
V
 
V
Q
 
Q
C
 
I
L
 
Y
G
 
T
T
 
A
A
 
Y
Q
 
H
-
 
P
-
 
I
-
 
D
-
 
A
-
 
Q
-
 
L
-
 
R
-
 
N
-
 
S
-
 
G
-
 
I
-
 
E
-
 
Y
-
 
G
S
 
S
P
 
P
I
 
V
Q
 
K
I
 
I
G
 
G
A
 
D
N
 
N
A
 
V
W
|
W
L
 
I
G
|
G
A
x
G
K
 
G
V
 
V
T
 
I
V
 
I
K
 
T
A
 
P
G
 
G
V
 
I
S
 
T
I
 
I
G
 
G
A
 
D
G
 
N
A
 
V
V
 
V
V
 
I
A
 
G
A
|
A
G
 
G
A
 
S
L
 
V
V
 
V
V
 
T
S
 
K
D
 
D
I
 
I
P
 
P
P
 
P
D
 
N
A
 
T
I
 
V
A
 
A
V
|
V
G
 
G
R
 
N
P
 
P
A
 
C
R
 
R
I
 
V
I
 
I
A
x
K

5u2kA Crystal structure of galactoside o-acetyltransferase complex with coa (h3 space group)
32% identity, 33% coverage: 18:123/323 of query aligns to 76:181/190 of 5u2kA

query
sites
5u2kA
E
 
K
L
 
L
G
 
G
R
 
K
H
 
N
V
 
V
W
 
Y
I
 
V
R
 
N
A
 
T
A
 
N
S
 
C
R
 
Y
L
 
F
Q
x
M
N
 
D
-
 
G
-
 
G
-
 
Q
V
 
I
Q
 
T
L
 
I
G
 
G
D
 
D
D
 
N
C
 
V
F
 
F
V
 
I
G
 
G
F
 
-
K
 
-
S
 
P
D
 
N
L
 
C
R
 
G
F
 
F
V
x
Y
A
 
T
I
x
A
G
 
T
K
x
H
A
 
P
S
 
L
M
 
N
L
 
F
A
 
H
T
 
H
G
 
R
V
 
N
Q
 
E
C
 
G
L
 
F
G
 
E
T
 
K
A
 
A
Q
 
-
S
 
G
P
 
P
I
 
I
Q
 
H
I
 
I
G
 
G
A
 
S
N
 
N
A
 
T
W
 
W
L
 
F
G
 
G
A
 
G
K
 
H
V
 
V
T
 
A
V
 
V
K
x
L
A
 
P
G
 
G
V
 
V
S
 
T
I
 
I
G
 
G
A
 
E
G
 
G
A
 
S
V
 
V
V
 
I
A
 
G
A
 
A
G
 
G
A
 
S
L
 
V
V
 
V
V
x
T
S
x
K
D
 
D
I
 
I
P
 
P
P
 
P
D
 
H
A
 
S
I
 
L
A
 
A
V
 
V
G
 
G
R
 
N
P
 
P
A
 
C
R
 
K
I
 
V
I
 
V

1krvA Galactoside acetyltransferase in complex with coa and pnp-beta-gal (see paper)
30% identity, 33% coverage: 19:123/323 of query aligns to 57:181/201 of 1krvA

query
sites
1krvA
L
 
V
G
 
G
R
 
E
H
 
N
V
 
A
W
 
W
I
 
V
R
 
E
A
 
P
A
 
P
S
 
V
R
 
Y
L
 
F
Q
x
S
-
 
Y
-
 
G
-
 
S
N
 
N
V
 
I
Q
 
H
L
 
I
G
 
G
D
 
R
D
 
N
C
 
F
F
x
Y
V
 
A
G
x
N
F
 
F
K
 
N
-
 
L
-
 
T
-
 
I
S
x
V
D
 
D
L
x
D
R
 
Y
F
 
T
V
 
V
A
 
T
I
 
I
G
 
G
K
 
D
A
 
N
S
 
V
M
 
L
L
 
I
A
|
A
T
 
P
G
 
N
V
 
V
Q
 
T
C
 
L
L
x
S
G
 
V
T
|
T
A
 
G
Q
 
H
S
 
P
-
 
V
-
 
H
-
 
H
-
 
E
-
 
L
-
 
R
-
 
K
-
 
N
-
 
G
-
 
E
-
x
M
-
 
Y
-
 
S
-
 
F
P
 
P
I
 
I
Q
 
T
I
 
I
G
 
G
A
 
N
N
 
N
A
 
V
W
|
W
L
 
I
G
|
G
A
x
S
K
 
H
V
 
V
T
 
V
V
 
I
K
x
N
A
 
P
G
 
G
V
 
V
S
 
T
I
 
I
G
 
G
A
 
D
G
 
N
A
 
S
V
 
V
V
 
I
A
 
G
A
|
A
G
 
G
A
 
S
L
 
I
V
 
V
V
 
T
S
 
K
D
 
D
I
 
I
P
 
P
P
 
P
D
 
N
A
 
V
I
 
V
A
 
A
V
 
A
G
 
G
R
 
V
P
|
P
A
 
C
R
|
R
I
 
V
I
 
I

Sites not aligning to the query:

1kruA Galactoside acetyltransferase in complex with iptg and coenzyme a (see paper)
30% identity, 33% coverage: 19:123/323 of query aligns to 57:181/201 of 1kruA

query
sites
1kruA
L
 
V
G
 
G
R
 
E
H
 
N
V
 
A
W
|
W
I
 
V
R
 
E
A
 
P
A
 
P
S
 
V
R
 
Y
L
 
F
Q
x
S
-
 
Y
-
 
G
-
 
S
N
 
N
V
 
I
Q
 
H
L
 
I
G
 
G
D
 
R
D
 
N
C
 
F
F
x
Y
V
 
A
G
x
N
F
 
F
K
 
N
-
 
L
-
 
T
-
 
I
S
x
V
D
 
D
L
x
D
R
 
Y
F
 
T
V
 
V
A
 
T
I
 
I
G
 
G
K
 
D
A
 
N
S
 
V
M
x
L
L
 
I
A
 
A
T
 
P
G
 
N
V
 
V
Q
 
T
C
 
L
L
 
S
G
 
V
T
 
T
A
 
G
Q
x
H
S
 
P
-
 
V
-
 
H
-
 
H
-
 
E
-
 
L
-
 
R
-
 
K
-
 
N
-
 
G
-
 
E
-
x
M
-
 
Y
-
 
S
-
 
F
P
 
P
I
 
I
Q
 
T
I
 
I
G
 
G
A
 
N
N
 
N
A
 
V
W
|
W
L
 
I
G
|
G
A
x
S
K
 
H
V
 
V
T
 
V
V
 
I
K
 
N
A
 
P
G
 
G
V
 
V
S
 
T
I
 
I
G
 
G
A
 
D
G
 
N
A
 
S
V
 
V
V
 
I
A
x
G
A
|
A
G
 
G
A
 
S
L
 
I
V
 
V
V
 
T
S
 
K
D
 
D
I
 
I
P
 
P
P
 
P
D
 
N
A
 
V
I
 
V
A
 
A
V
 
A
G
 
G
R
 
V
P
|
P
A
 
C
R
 
R
I
 
V
I
 
I

Sites not aligning to the query:

1krrA Galactoside acetyltransferase in complex with acetyl-coenzyme a (see paper)
30% identity, 33% coverage: 19:123/323 of query aligns to 57:181/200 of 1krrA

query
sites
1krrA
L
 
V
G
 
G
R
 
E
H
 
N
V
 
A
W
 
W
I
 
V
R
 
E
A
 
P
A
 
P
S
 
V
R
 
Y
L
 
F
Q
 
S
-
 
Y
-
 
G
-
 
S
N
 
N
V
 
I
Q
 
H
L
 
I
G
 
G
D
 
R
D
 
N
C
 
F
F
 
Y
V
 
A
G
x
N
F
 
F
K
 
N
-
 
L
-
 
T
-
 
I
S
 
V
D
 
D
L
 
D
R
 
Y
F
 
T
V
 
V
A
 
T
I
 
I
G
 
G
K
 
D
A
 
N
S
 
V
M
 
L
L
x
I
A
|
A
T
x
P
G
 
N
V
 
V
Q
 
T
C
 
L
L
 
S
G
 
V
T
|
T
A
 
G
Q
x
H
S
 
P
-
 
V
-
 
H
-
 
H
-
 
E
-
 
L
-
 
R
-
 
K
-
 
N
-
 
G
-
 
E
-
 
M
-
 
Y
-
 
S
-
 
F
P
 
P
I
 
I
Q
 
T
I
 
I
G
 
G
A
 
N
N
 
N
A
 
V
W
 
W
L
 
I
G
|
G
A
x
S
K
 
H
V
 
V
T
 
V
V
 
I
K
x
N
A
 
P
G
 
G
V
 
V
S
 
T
I
 
I
G
 
G
A
 
D
G
 
N
A
 
S
V
 
V
V
 
I
A
x
G
A
|
A
G
 
G
A
 
S
L
 
I
V
 
V
V
 
T
S
 
K
D
 
D
I
 
I
P
 
P
P
 
P
D
 
N
A
 
V
I
 
V
A
 
A
V
x
A
G
 
G
R
 
V
P
|
P
A
 
C
R
 
R
I
 
V
I
 
I

Sites not aligning to the query:

P07464 Galactoside O-acetyltransferase; GAT; Acetyl-CoA:galactoside 6-O-acetyltransferase; Thiogalactoside acetyltransferase; Thiogalactoside transacetylase; EC 2.3.1.18 from Escherichia coli (strain K12) (see 3 papers)
30% identity, 33% coverage: 19:123/323 of query aligns to 58:182/203 of P07464

query
sites
P07464
L
 
V
G
 
G
R
 
E
H
 
N
V
 
A
W
 
W
I
 
V
R
 
E
A
 
P
A
 
P
S
 
V
R
 
Y
L
 
F
Q
x
S
-
 
Y
-
 
G
-
 
S
N
 
N
V
 
I
Q
 
H
L
 
I
G
 
G
D
 
R
D
 
N
C
 
F
F
 
Y
V
 
A
G
x
N
F
 
F
K
 
N
-
 
L
-
 
T
-
 
I
S
 
V
D
 
D
L
x
D
R
 
Y
F
 
T
V
 
V
A
 
T
I
 
I
G
 
G
K
 
D
A
 
N
S
 
V
M
 
L
L
 
I
A
 
A
T
 
P
G
 
N
V
 
V
Q
 
T
C
 
L
L
 
S
G
 
V
T
 
T
A
 
G
Q
x
H
S
 
P
-
 
V
-
 
H
-
 
H
-
 
E
-
 
L
-
 
R
-
 
K
-
 
N
-
 
G
-
 
E
-
 
M
-
 
Y
-
 
S
-
 
F
P
 
P
I
 
I
Q
 
T
I
 
I
G
 
G
A
 
N
N
 
N
A
 
V
W
 
W
L
 
I
G
 
G
A
x
S
K
 
H
V
 
V
T
 
V
V
 
I
K
 
N
A
 
P
G
 
G
V
 
V
S
 
T
I
 
I
G
 
G
A
 
D
G
 
N
A
 
S
V
 
V
V
 
I
A
 
G
A
|
A
G
 
G
A
 
S
L
 
I
V
 
V
V
x
T
S
x
K
D
 
D
I
 
I
P
 
P
P
 
P
D
 
N
A
 
V
I
 
V
A
 
A
V
 
A
G
 
G
R
 
V
P
 
P
A
 
C
R
|
R
I
 
V
I
 
I

Sites not aligning to the query:

3igjC Crystal structure of maltose o-acetyltransferase complexed with acetyl coenzyme a from bacillus anthracis
32% identity, 28% coverage: 33:123/323 of query aligns to 76:183/188 of 3igjC

query
sites
3igjC
N
 
N
V
 
I
Q
 
H
L
 
V
G
 
G
D
 
K
D
 
S
C
 
F
F
|
F
V
 
A
G
 
N
F
 
F
K
 
N
S
 
C
-
 
V
-
 
I
-
 
L
D
 
D
L
 
V
R
 
C
F
 
E
V
 
V
A
 
R
I
 
I
G
 
G
K
 
D
A
 
H
S
 
C
M
 
M
L
 
F
A
|
A
T
 
P
G
 
G
V
 
V
Q
 
H
C
 
I
L
x
Y
G
 
T
T
x
A
A
 
T
Q
x
H
-
 
P
-
 
L
-
 
H
-
 
P
-
 
V
-
 
E
-
 
R
-
 
N
-
 
S
-
 
G
-
 
K
-
 
E
-
 
Y
-
 
G
S
 
K
P
 
P
I
 
V
Q
 
K
I
 
I
G
 
G
A
 
N
N
 
N
A
 
V
W
 
W
L
 
V
G
|
G
A
 
G
K
 
G
V
 
A
T
 
I
V
 
I
K
x
N
A
 
P
G
 
G
V
 
V
S
 
S
I
 
I
G
 
G
A
 
D
G
 
N
A
 
A
V
 
V
V
 
I
A
|
A
A
x
S
G
 
G
A
 
A
L
 
V
V
 
V
V
x
T
S
 
K
D
 
D
I
 
V
P
 
P
P
 
N
D
 
N
A
 
V
I
 
V
A
 
V
V
 
G
G
 
G
R
x
N
P
 
P
A
 
A
R
 
K
I
 
V
I
 
I

7uujA Crystal structure of aminoglycoside resistance enzyme apma, complex with gentamicin
31% identity, 32% coverage: 25:126/323 of query aligns to 131:232/272 of 7uujA

query
sites
7uujA
I
 
I
R
 
H
A
 
A
A
 
N
S
x
H
R
 
Q
L
 
L
Q
 
N
N
 
M
V
 
T
Q
 
F
L
 
V
G
 
S
D
|
D
D
|
D
C
 
I
F
 
Q
V
 
N
G
 
F
F
 
F
K
 
N
S
 
E
D
 
E
L
 
S
R
 
-
F
 
-
V
 
M
A
 
A
I
 
V
G
 
F
K
 
Q
A
 
E
S
 
K
M
 
L
L
 
R
A
 
K
T
 
D
G
 
P
V
 
K
Q
 
H
C
 
P
L
 
Y
G
 
A
T
 
Y
A
 
S
Q
 
K
S
 
E
P
 
P
I
 
M
Q
 
T
I
 
I
G
 
G
A
 
S
N
 
D
A
 
V
W
 
Y
L
 
I
G
 
G
A
 
A
K
 
H
V
 
A
T
 
F
V
 
I
K
 
N
A
 
A
G
 
S
V
 
T
-
 
V
-
 
T
S
 
S
I
 
I
G
 
G
A
 
D
G
 
G
A
 
A
V
 
I
V
 
I
A
 
G
A
 
S
G
 
G
A
 
A
L
 
V
V
 
V
V
 
L
S
 
E
D
 
N
I
 
V
P
 
P
P
 
P
D
 
F
A
 
A
I
 
V
A
 
V
V
 
V
G
 
G
R
 
V
P
 
P
A
 
A
R
 
R
I
 
I
I
 
K
A
 
R
Y
 
Y
R
 
R

Sites not aligning to the query:

7jm2A Crystal structure of aminoglycoside resistance enzyme apma, complex with apramycin
31% identity, 32% coverage: 25:126/323 of query aligns to 131:232/272 of 7jm2A

query
sites
7jm2A
I
 
I
R
 
H
A
 
A
A
 
N
S
x
H
R
 
Q
L
 
L
Q
 
N
N
 
M
V
 
T
Q
 
F
L
 
V
G
 
S
D
|
D
D
|
D
C
 
I
F
x
Q
V
 
N
G
 
F
F
 
F
K
 
N
S
 
E
D
 
E
L
 
S
R
 
-
F
 
-
V
 
M
A
 
A
I
 
V
G
 
F
K
 
Q
A
 
E
S
 
K
M
 
L
L
 
R
A
 
K
T
 
D
G
 
P
V
 
K
Q
 
H
C
 
P
L
x
Y
G
 
A
T
x
Y
A
 
S
Q
 
K
S
 
E
P
 
P
I
 
M
Q
 
T
I
 
I
G
 
G
A
 
S
N
 
D
A
 
V
W
 
Y
L
 
I
G
 
G
A
 
A
K
 
H
V
 
A
T
 
F
V
 
I
K
 
N
A
 
A
G
 
S
V
 
T
-
 
V
-
 
T
S
 
S
I
 
I
G
 
G
A
 
D
G
 
G
A
 
A
V
 
I
V
 
I
A
 
G
A
 
S
G
 
G
A
 
A
L
 
V
V
 
V
V
 
L
S
 
E
D
 
N
I
 
V
P
 
P
P
 
P
D
 
F
A
 
A
I
 
V
A
 
V
V
 
V
G
 
G
R
 
V
P
 
P
A
 
A
R
 
R
I
 
I
I
 
K
A
 
R
Y
 
Y
R
 
R

Sites not aligning to the query:

7jm1A Crystal structure of aminoglycoside resistance enzyme apma, complex with acetyl-coa
31% identity, 32% coverage: 25:126/323 of query aligns to 131:232/272 of 7jm1A

query
sites
7jm1A
I
 
I
R
x
H
A
 
A
A
x
N
S
 
H
R
 
Q
L
 
L
Q
 
N
N
 
M
V
 
T
Q
 
F
L
 
V
G
 
S
D
 
D
D
 
D
C
 
I
F
 
Q
V
 
N
G
 
F
F
 
F
K
 
N
S
 
E
D
 
E
L
 
S
R
 
-
F
 
-
V
 
M
A
 
A
I
 
V
G
 
F
K
 
Q
A
 
E
S
 
K
M
 
L
L
 
R
A
 
K
T
 
D
G
 
P
V
 
K
Q
 
H
C
 
P
L
 
Y
G
 
A
T
 
Y
A
 
S
Q
 
K
S
 
E
P
 
P
I
 
M
Q
 
T
I
 
I
G
 
G
A
 
S
N
 
D
A
 
V
W
x
Y
L
 
I
G
|
G
A
 
A
K
 
H
V
 
A
T
x
F
V
 
I
K
 
N
A
 
A
G
 
S
V
 
T
-
 
V
-
 
T
S
 
S
I
 
I
G
 
G
A
 
D
G
 
G
A
 
A
V
 
I
V
 
I
A
x
G
A
x
S
G
 
G
A
 
A
L
 
V
V
 
V
V
x
L
S
 
E
D
 
N
I
 
V
P
 
P
P
 
P
D
 
F
A
 
A
I
 
V
A
 
V
V
|
V
G
 
G
R
x
V
P
 
P
A
 
A
R
 
R
I
 
I
I
x
K
A
 
R
Y
 
Y
R
 
R

Sites not aligning to the query:

7uunA Crystal structure of aminoglycoside resistance enzyme apma, complex with neomycin (see paper)
31% identity, 32% coverage: 25:126/323 of query aligns to 132:233/273 of 7uunA

query
sites
7uunA
I
 
I
R
 
H
A
 
A
A
 
N
S
x
H
R
 
Q
L
 
L
Q
 
N
N
 
M
V
 
T
Q
 
F
L
 
V
G
 
S
D
|
D
D
|
D
C
 
I
F
 
Q
V
 
N
G
 
F
F
 
F
K
 
N
S
 
E
D
 
E
L
 
S
R
 
-
F
 
-
V
 
M
A
 
A
I
 
V
G
 
F
K
 
Q
A
 
E
S
 
K
M
 
L
L
 
R
A
 
K
T
 
D
G
 
P
V
 
K
Q
 
H
C
 
P
L
 
Y
G
 
A
T
 
Y
A
 
S
Q
 
K
S
 
E
P
 
P
I
 
M
Q
 
T
I
 
I
G
 
G
A
 
S
N
 
D
A
 
V
W
 
Y
L
 
I
G
 
G
A
 
A
K
 
H
V
 
A
T
 
F
V
 
I
K
 
N
A
 
A
G
 
S
V
 
T
-
 
V
-
 
T
S
 
S
I
 
I
G
 
G
A
 
D
G
 
G
A
 
A
V
 
I
V
 
I
A
 
G
A
 
S
G
 
G
A
 
A
L
 
V
V
 
V
V
 
L
S
 
E
D
 
N
I
 
V
P
 
P
P
 
P
D
 
F
A
 
A
I
 
V
A
 
V
V
 
V
G
 
G
R
 
V
P
 
P
A
 
A
R
 
R
I
 
I
I
 
K
A
 
R
Y
 
Y
R
 
R

Sites not aligning to the query:

7uumA Crystal structure of aminoglycoside resistance enzyme apma, complex with paromomycin and coenzyme a (see paper)
31% identity, 32% coverage: 25:126/323 of query aligns to 133:234/274 of 7uumA

query
sites
7uumA
I
 
I
R
x
H
A
 
A
A
x
N
S
x
H
R
 
Q
L
 
L
Q
 
N
N
 
M
V
 
T
Q
 
F
L
 
V
G
 
S
D
|
D
D
|
D
C
 
I
F
 
Q
V
 
N
G
 
F
F
 
F
K
 
N
S
 
E
D
 
E
L
 
S
R
 
-
F
 
-
V
 
M
A
 
A
I
 
V
G
 
F
K
 
Q
A
 
E
S
 
K
M
 
L
L
 
R
A
 
K
T
 
D
G
 
P
V
x
K
Q
 
H
C
 
P
L
 
Y
G
 
A
T
 
Y
A
 
S
Q
 
K
S
 
E
P
 
P
I
 
M
Q
 
T
I
 
I
G
 
G
A
 
S
N
 
D
A
 
V
W
 
Y
L
 
I
G
 
G
A
 
A
K
 
H
V
 
A
T
x
F
V
 
I
K
 
N
A
 
A
G
 
S
V
 
T
-
 
V
-
 
T
S
 
S
I
 
I
G
 
G
A
 
D
G
 
G
A
 
A
V
 
I
V
 
I
A
 
G
A
 
S
G
 
G
A
 
A
L
 
V
V
 
V
V
 
L
S
 
E
D
 
N
I
 
V
P
 
P
P
 
P
D
 
F
A
 
A
I
 
V
A
 
V
V
 
V
G
 
G
R
 
V
P
|
P
A
 
A
R
 
R
I
 
I
I
 
K
A
 
R
Y
 
Y
R
 
R

Sites not aligning to the query:

7uulA Crystal structure of aminoglycoside resistance enzyme apma, complex with kanamycin b and coenzyme a (see paper)
31% identity, 32% coverage: 25:126/323 of query aligns to 132:233/274 of 7uulA

query
sites
7uulA
I
 
I
R
 
H
A
 
A
A
x
N
S
x
H
R
 
Q
L
|
L
Q
 
N
N
 
M
V
 
T
Q
 
F
L
 
V
G
 
S
D
|
D
D
|
D
C
 
I
F
 
Q
V
 
N
G
 
F
F
 
F
K
 
N
S
 
E
D
 
E
L
 
S
R
 
-
F
 
-
V
 
M
A
 
A
I
 
V
G
 
F
K
 
Q
A
 
E
S
 
K
M
 
L
L
 
R
A
 
K
T
 
D
G
 
P
V
 
K
Q
 
H
C
 
P
L
 
Y
G
 
A
T
 
Y
A
 
S
Q
 
K
S
 
E
P
 
P
I
 
M
Q
 
T
I
 
I
G
 
G
A
 
S
N
 
D
A
 
V
W
x
Y
L
 
I
G
|
G
A
|
A
K
 
H
V
 
A
T
x
F
V
 
I
K
 
N
A
 
A
G
 
S
V
 
T
-
 
V
-
 
T
S
 
S
I
 
I
G
 
G
A
 
D
G
 
G
A
 
A
V
 
I
V
 
I
A
 
G
A
x
S
G
 
G
A
 
A
L
 
V
V
 
V
V
x
L
S
 
E
D
 
N
I
 
V
P
 
P
P
 
P
D
 
F
A
 
A
I
 
V
A
 
V
V
|
V
G
 
G
R
 
V
P
 
P
A
 
A
R
 
R
I
 
I
I
x
K
A
x
R
Y
 
Y
R
 
R

Sites not aligning to the query:

7uukC Crystal structure of aminoglycoside resistance enzyme apma, complex with tobramycin (see paper)
31% identity, 32% coverage: 25:126/323 of query aligns to 133:234/276 of 7uukC

query
sites
7uukC
I
 
I
R
 
H
A
 
A
A
 
N
S
x
H
R
 
Q
L
 
L
Q
 
N
N
 
M
V
 
T
Q
 
F
L
 
V
G
 
S
D
|
D
D
|
D
C
 
I
F
 
Q
V
 
N
G
 
F
F
 
F
K
 
N
S
 
E
D
 
E
L
 
S
R
 
-
F
 
-
V
 
M
A
 
A
I
 
V
G
 
F
K
 
Q
A
 
E
S
 
K
M
 
L
L
 
R
A
 
K
T
 
D
G
 
P
V
 
K
Q
 
H
C
 
P
L
 
Y
G
 
A
T
 
Y
A
 
S
Q
 
K
S
 
E
P
 
P
I
 
M
Q
 
T
I
 
I
G
 
G
A
 
S
N
 
D
A
 
V
W
 
Y
L
 
I
G
 
G
A
 
A
K
 
H
V
 
A
T
 
F
V
 
I
K
 
N
A
 
A
G
 
S
V
 
T
-
 
V
-
 
T
S
 
S
I
 
I
G
 
G
A
 
D
G
 
G
A
 
A
V
 
I
V
 
I
A
 
G
A
 
S
G
 
G
A
 
A
L
 
V
V
 
V
V
 
L
S
 
E
D
 
N
I
 
V
P
 
P
P
 
P
D
 
F
A
 
A
I
 
V
A
 
V
V
 
V
G
 
G
R
 
V
P
 
P
A
 
A
R
 
R
I
 
I
I
 
K
A
 
R
Y
 
Y
R
 
R

Sites not aligning to the query:

3nz2C Crystal structure of hexapeptide-repeat containing-acetyltransferase vca0836 complexed with acetyl co enzyme a from vibrio cholerae o1 biovar eltor
31% identity, 28% coverage: 32:123/323 of query aligns to 70:178/183 of 3nz2C

query
sites
3nz2C
Q
 
K
N
 
T
V
 
I
Q
 
R
L
 
I
G
 
G
D
 
D
D
 
H
C
 
T
F
 
F
V
 
I
G
 
N
F
 
M
K
 
N
S
 
V
D
 
V
L
 
M
-
 
L
-
 
D
-
 
G
-
 
A
-
 
P
-
 
I
-
 
T
-
 
I
-
 
G
R
 
D
F
 
H
V
 
V
A
 
L
I
 
I
G
 
G
K
 
P
A
 
S
S
 
T
M
 
Q
L
 
F
A
x
Y
T
 
T
G
 
A
V
 
S
Q
x
H
C
 
S
L
 
L
G
 
D
-
 
Y
-
 
R
-
 
R
-
 
R
-
 
Q
-
 
A
-
 
W
-
 
E
T
 
T
A
 
I
Q
 
C
S
 
K
P
 
P
I
 
I
Q
 
V
I
 
I
G
 
E
A
 
D
N
 
D
A
 
V
W
 
W
L
 
I
G
|
G
A
 
G
K
 
N
V
 
V
T
 
V
V
 
I
K
 
N
A
 
Q
G
 
G
V
 
V
S
 
T
I
 
I
G
 
G
A
 
A
G
 
R
A
 
S
V
 
V
V
 
V
A
|
A
A
|
A
G
x
N
A
 
S
L
 
V
V
 
V
V
x
N
S
 
Q
D
 
D
I
 
V
P
 
P
P
 
P
D
 
D
A
 
T
I
 
L
A
 
V
V
x
G
G
 
G
R
x
T
P
|
P
A
 
A
R
 
R
I
 
I
I
x
L

Sites not aligning to the query:

3ectA Crystal structure of the hexapeptide-repeat containing- acetyltransferase vca0836 from vibrio cholerae
31% identity, 28% coverage: 32:123/323 of query aligns to 63:171/176 of 3ectA

query
sites
3ectA
Q
 
K
N
 
T
V
 
I
Q
 
R
L
 
I
G
 
G
D
 
D
D
 
H
C
 
T
F
 
F
V
 
I
G
 
N
F
 
M
K
 
N
S
 
V
D
 
V
L
 
M
-
 
L
-
 
D
-
 
G
-
 
A
-
 
P
-
 
I
-
 
T
-
 
I
-
 
G
R
 
D
F
 
H
V
 
V
A
 
L
I
 
I
G
 
G
K
 
P
A
 
S
S
 
T
M
 
Q
L
 
F
A
 
Y
T
 
T
G
 
A
V
 
S
Q
 
H
C
 
S
L
 
L
G
 
D
-
 
Y
-
 
R
-
 
R
-
 
R
-
 
Q
-
 
A
-
 
W
-
 
E
T
 
T
A
 
I
Q
 
C
S
 
K
P
 
P
I
 
I
Q
 
V
I
 
I
G
 
E
A
 
D
N
 
D
A
 
V
W
 
W
L
 
I
G
 
G
A
 
G
K
 
N
V
 
V
T
 
V
V
 
I
K
 
N
A
 
Q
G
|
G
V
 
V
S
 
T
I
 
I
G
 
G
A
 
A
G
 
R
A
 
S
V
 
V
V
 
V
A
 
A
A
 
A
G
 
N
A
 
S
L
 
V
V
 
V
V
 
N
S
 
Q
D
|
D
I
 
V
P
 
P
P
 
P
D
 
D
A
 
T
I
 
L
A
 
V
V
 
G
G
 
G
R
 
T
P
 
P
A
 
A
R
 
R
I
 
I
I
 
L

3nz2J Crystal structure of hexapeptide-repeat containing-acetyltransferase vca0836 complexed with acetyl co enzyme a from vibrio cholerae o1 biovar eltor
31% identity, 28% coverage: 32:123/323 of query aligns to 73:181/185 of 3nz2J

query
sites
3nz2J
Q
 
K
N
 
T
V
 
I
Q
 
R
L
 
I
G
 
G
D
 
D
D
 
H
C
 
T
F
 
F
V
 
I
G
 
N
F
 
M
K
 
N
S
 
V
D
 
V
L
 
M
-
 
L
-
 
D
-
 
G
-
 
A
-
 
P
-
 
I
-
 
T
-
 
I
-
 
G
R
 
D
F
 
H
V
 
V
A
 
L
I
 
I
G
|
G
K
 
P
A
 
S
S
 
T
M
 
Q
L
 
F
A
x
Y
T
 
T
G
 
A
V
 
S
Q
x
H
C
 
S
L
 
L
G
 
D
-
 
Y
-
 
R
-
 
R
-
 
R
-
 
Q
-
 
A
-
 
W
-
 
E
T
 
T
A
 
I
Q
 
C
S
 
K
P
 
P
I
 
I
Q
 
V
I
 
I
G
 
E
A
 
D
N
 
D
A
 
V
W
|
W
L
 
I
G
|
G
A
 
G
K
 
N
V
 
V
T
 
V
V
 
I
K
 
N
A
 
Q
G
 
G
V
 
V
S
 
T
I
 
I
G
 
G
A
 
A
G
 
R
A
 
S
V
 
V
V
 
V
A
|
A
A
|
A
G
 
N
A
 
S
L
 
V
V
 
V
V
x
N
S
 
Q
D
 
D
I
 
V
P
 
P
P
 
P
D
 
D
A
 
T
I
 
L
A
 
V
V
x
G
G
 
G
R
x
T
P
|
P
A
 
A
R
 
R
I
 
I
I
 
L

Sites not aligning to the query:

4mzuF Crystal structure of fdtd, a bifunctional ketoisomerase/n- acetyltransferase from shewanella denitrificans (see paper)
28% identity, 58% coverage: 2:189/323 of query aligns to 15:203/294 of 4mzuF

query
sites
4mzuF
D
 
D
D
 
N
T
 
T
N
 
K
V
 
V
V
x
W
E
x
Q
V
 
-
L
 
F
T
 
C
T
 
V
I
 
I
D
 
L
S
 
A
G
 
G
S
 
A
E
 
V
L
 
I
G
 
G
R
 
R
H
 
N
V
 
C
W
 
N
I
 
I
R
x
C
A
 
A
A
 
N
S
 
S
R
 
L
L
 
I
Q
 
E
N
 
N
-
 
D
V
 
V
Q
 
V
L
 
I
G
 
G
D
 
D
D
 
N
C
 
-
F
 
-
V
 
V
G
 
T
F
 
I
K
 
K
S
 
S
D
 
G
L
 
V
R
 
Q
F
 
I
-
 
W
-
 
D
-
 
G
-
 
I
-
 
H
-
 
I
-
 
Q
-
 
D
-
 
D
V
 
V
A
 
F
I
 
I
G
 
G
K
 
P
A
 
N
S
 
V
M
 
T
L
 
F
A
 
T
T
x
N
G
x
D
V
x
K
Q
 
Q
C
 
P
L
 
R
G
 
S
T
 
K
A
 
I
Q
 
K
S
 
T
P
 
I
I
 
V
Q
 
K
I
 
K
G
 
G
A
 
A
N
 
S
A
 
-
W
 
-
L
 
I
G
|
G
A
|
A
K
 
N
V
 
S
T
 
T
V
 
I
K
x
L
A
 
P
G
 
G
V
 
I
S
 
L
I
 
I
G
 
G
A
 
E
G
 
N
A
 
A
V
 
M
V
 
V
A
x
G
A
|
A
G
 
G
A
 
A
L
 
V
V
 
I
V
x
T
S
x
K
D
 
N
I
 
V
P
 
P
P
 
D
D
 
N
A
 
A
I
 
I
A
 
V
V
x
I
G
 
G
R
x
N
P
 
P
A
 
G
R
|
R
I
 
I
I
 
T
A
 
G
Y
 
Y
R
 
V
S
 
E
V
 
A
V
 
F
E
 
E
D
 
L
G
 
K
A
 
L
P
 
Q
S
 
-
P
 
-
E
 
-
H
 
-
V
 
-
L
 
M
A
 
S
K
 
K
V
 
V
R
 
K
E
 
G
R
 
V
A
 
S
R
 
L
Q
 
H
G
 
K
M
 
F
P
 
H
S
 
L
L
 
V
L
 
N
D
 
D
-
 
L
R
 
R
A
 
G
S
 
N
L
 
L
S
 
S
V
 
V
A
 
G
R
 
E
L
 
F
K
 
E
E
 
K
L
 
D
N
 
I
P
 
P
D
 
F
T
 
T
Q
 
P
T
 
K
W
x
R
D
 
Y
I
 
F
S
 
T
E
 
V
D
 
F
T
 
G
L
 
V
I
 
P
D
 
N
A
 
K
E
 
E
L
 
V
R
 
R
G
|
G

Sites not aligning to the query:

1kk4A Crystal structure of vat(d) in complex with acetyl-coa (see paper)
46% identity, 18% coverage: 70:126/323 of query aligns to 107:167/205 of 1kk4A

query
sites
1kk4A
Q
 
Q
S
 
L
P
 
P
I
 
I
Q
x
K
-
 
G
-
 
D
-
 
T
-
 
I
I
 
I
G
 
G
A
 
N
N
 
D
A
 
V
W
|
W
L
 
I
G
|
G
A
x
K
K
 
D
V
 
V
T
 
V
V
 
I
K
 
M
A
 
P
G
 
G
V
 
V
S
 
K
I
 
I
G
 
G
A
 
D
G
 
G
A
 
A
V
 
I
V
 
V
A
|
A
A
|
A
G
 
N
A
 
S
L
 
V
V
 
V
V
|
V
S
x
K
D
 
D
I
 
I
P
 
A
P
 
P
D
 
Y
A
 
M
I
x
L
A
 
A
V
x
G
G
|
G
R
 
N
P
|
P
A
 
A
R
 
N
I
 
E
I
|
I
A
 
K
Y
 
Q
R
 
R

Sites not aligning to the query:

1mrlA Crystal structure of streptogramin a acetyltransferase with dalfopristin (see paper)
46% identity, 18% coverage: 70:126/323 of query aligns to 107:167/204 of 1mrlA

query
sites
1mrlA
Q
 
Q
S
x
L
P
 
P
I
 
I
Q
 
K
-
 
G
-
 
D
-
 
T
-
 
I
I
 
I
G
 
G
A
 
N
N
 
D
A
 
V
W
 
W
L
 
I
G
 
G
A
 
K
K
 
D
V
 
V
T
 
V
V
 
I
K
 
M
A
 
P
G
 
G
V
 
V
S
 
K
I
 
I
G
 
G
A
 
D
G
 
G
A
 
A
V
 
I
V
 
V
A
 
A
A
 
A
G
 
N
A
 
S
L
 
V
V
 
V
V
 
V
S
 
K
D
 
D
I
 
I
P
 
A
P
 
P
D
 
Y
A
 
M
I
 
L
A
 
A
V
 
G
G
 
G
R
 
N
P
 
P
A
 
A
R
 
N
I
 
E
I
 
I
A
 
K
Y
 
Q
R
 
R

Sites not aligning to the query:

Query Sequence

>Pf1N1B4_1226 FitnessBrowser__pseudo1_N1B4:Pf1N1B4_1226
VDDTNVVEVLTTIDSGSELGRHVWIRAASRLQNVQLGDDCFVGFKSDLRFVAIGKASMLA
TGVQCLGTAQSPIQIGANAWLGAKVTVKAGVSIGAGAVVAAGALVVSDIPPDAIAVGRPA
RIIAYRSVVEDGAPSPEHVLAKVRERARQGMPSLLDRASLSVARLKELNPDTQTWDISED
TLIDAELRGGASVEIARDCILIGRSVRQGGMSQLGGIDIGTGTSLGEGIVIEAAGGVTIG
AFSELGARVTVVTSSHDHSFRSLPWEEAPVHIGSRCVIGEGAIIVGPLSIGDGAVIKPYS
VVIRDVLENTVVNGVVQLMEIQE

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory