Comparing Pf1N1B4_3823 FitnessBrowser__pseudo1_N1B4:Pf1N1B4_3823 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 2 hits to proteins with known functional sites (download)
6r6uA Crystal structure of human cis-aconitate decarboxylase (see paper)
24% identity, 91% coverage: 38:485/494 of query aligns to 27:450/458 of 6r6uA
A6NK06 Cis-aconitate decarboxylase; CAD; Aconitate decarboxylase; Aconitate decarboxylase 1; Cis-aconitic acid decarboxylase; Immune-responsive gene 1 protein; EC 4.1.1.6 from Homo sapiens (Human) (see paper)
24% identity, 91% coverage: 38:485/494 of query aligns to 30:453/481 of A6NK06
>Pf1N1B4_3823 FitnessBrowser__pseudo1_N1B4:Pf1N1B4_3823
MSANVDLNIRPDYDTVLQDIADYVLNFKIESPEALDTARNCLMDTLGCGLLALRFPECTK
HLGPIVEGTVVPFGARVPGTSYRLDPVKAAWDIGCIVRWLDYNDTWLAAEWGHPSDNLGA
ILAVADHLSQKRLANGDAPLTIRVVLEAMIMAHEIQGVIALENSFNRVGIDHVILVKVAS
TAVAAKLMGANREQLLSALSHAFADGQALRTYRHAPNAGSRKSWAAGDASSRGVRLADIA
MRGEMGIPGVLTAKQWGFYDVLFSHTNNDLALKPEDKRAFSFSRPFGSYVMENVLFKISF
PAEFHAQTACEAAVTLHPLVRNRLHEIDRIVITTHESAIRIISKVGPLANAADRDHCIQY
MIAVPLVFGNLVAEQYEDDFHAVHPIIDVLRDKMVIVEDPRFTREYLEPDKRSIANAVQV
FFKDGSSTKNVVVEYPIGHRRRRAEGIALLEDKFKANLATRFTAQRSAEIFALCKDQARL
EETAVNRFVDLFVI
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory