Comparing Pf1N1B4_4438 FitnessBrowser__pseudo1_N1B4:Pf1N1B4_4438 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 3 hits to proteins with known functional sites (download)
4jbeB 1.95 angstrom crystal structure of gamma-glutamyl phosphate reductase from saccharomonospora viridis.
30% identity, 80% coverage: 65:465/500 of query aligns to 15:384/412 of 4jbeB
7wxiA Gpr domain of drosophila p5cs filament with glutamate and atpgammas (see paper)
24% identity, 78% coverage: 99:488/500 of query aligns to 41:401/430 of 7wxiA
7wxgA Gpr domain closed form of drosophila p5cs filament with glutamate, atp, and NADPH (see paper)
24% identity, 78% coverage: 99:488/500 of query aligns to 41:401/430 of 7wxgA
>Pf1N1B4_4438 FitnessBrowser__pseudo1_N1B4:Pf1N1B4_4438
MSLALERLVAGTPIPFAGNRVTVVSPELAARFQPGDHLLVEQVSGELLLIPVADQQAAAV
AIERAESAFAAMSGVPDHAISEFFDHFAQRLETPECWALIAAANLADIERAKARGRSTTR
LLADERMRGDMIAGLRAWRDAPATRGKVVSCVEHDGWKVEQVVSPLGIVAFVFEGRPNVF
ADAAGVLRTGNTAVLRIGSDALGTAQAIVTHALNPALADAGLPTGAVSLVESVNHAAGWA
MFADRRLSLAVARGSGRAVSQLGSIAQQAGTAVSLHGTGGAWLIADKDADAQRFAAVVRN
SLDRKVCNTLNVCLIHRDRAAELVPLFLDALQQAGTARGQGCKLHIVEGSEACLPADWQS
ASVEVYRAEGYQTEALTEPLPEDQLGREWEWEETPEVSLKIVDDLEQAIVLFNRYSPQFT
VSLISEDAQAQERFYNAVNAPFVGNGITRWVDGQYALNKPELGLSNWESGRLFARSAILS
GDGVFTIRSRMTQTSLSVKR
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory