Comparing Pf1N1B4_4643 FitnessBrowser__pseudo1_N1B4:Pf1N1B4_4643 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 1 hits to proteins with known functional sites (download)
Q54VI3 Glutamate dehydrogenase 2; NAD-specific glutamate dehydrogenase; NAD-GDH; EC 1.4.1.2 from Dictyostelium discoideum (Social amoeba) (see paper)
25% identity, 28% coverage: 733:1187/1635 of query aligns to 470:896/1042 of Q54VI3
>Pf1N1B4_4643 FitnessBrowser__pseudo1_N1B4:Pf1N1B4_4643
MAFFTAASKADFQHQLQAALAQHISEQALPQVALFAEQFFGIISLDELTQRRLSDLAGCT
LSAWRLLERFDHAHPQVRVYNPDYERHGWQSTHTAVEVLHHDLPFLVDSVRTELNRRGYS
IHTLQTTVLSVRRGSKGELLEILPKGTQGEGILQESLMYLEIDRCANTAELNVLTKELEQ
VLGEVRVAVADFEPMKAKVQELIEGIDNSQFIINADEKSEIKSFLEWLVGNHFTFLGYEE
FVVGEDQNGGHIEYDQNSFLGLTKLLRAGLTVDDLRIEDYAVNYLREPTPLSFAKAAHPS
RVHRPAYPDYVSIRQIDANGKVVKECRFMGLYTSSVYGESVRVIPYIRRKVEIIEQRSGF
QAKAHLGKELAQVLEVLPRDDLFQTPVDELFTTVMSIVQIQERNKIRVFLRKDPYGRFCY
CLAYVPRDIYSTEVRQKIQQVLMDRLKASDCEFWTFFSESVLARVQLILRVDPKNRLDID
PVLLEKEVVQACRSWQDDYASLVVESFGEAQGTNVLADFPKGFPAGYRERFAAHSAVVDM
QHLLSLSEKNPLVMSFYQPLAQVSGQRMLHCKLYHADTPLALSDVLPILENLGLRVLGEF
PYRLRHNSGREFWIHDFAFTAAEGLELDIQQLNDTLQDAFVHIVRGDAENDAFNRLVLTA
GLPWRDVALLRAYARYMKQIRLGFDLGYIASTLNNHTDIARELTRLFKTRFYLARKLASD
DLEDKQQRLEHAILAALDDVQVLNEDRILRRYLDLIKATLRTNFYQTDTHGQNKSYFSFK
FNPHQIPELPKPVPKFEIFVYSPRVEGVHLRFGNVARGGLRWSDREEDFRTEVLGLVKAQ
QVKNSVIVPVGAKGGFLPRRLPLGGSRDEIAAEGIACYRIFISGLLDITDNLKDGALVPP
ANVVRHDDDDPYLVVAADKGTATFSDIANGIAIDYGFWLGDAFASGGSAGYDHKKMGITA
KGAWVGVQRHFRERGINVQEDSITVVGVGDMAGDVFGNGLLMSDKLQLVAAFNHLHIFID
PNPEPANSFAERQRLFDLPRSAWSDYDTSIMSEGGGIFSRSAKSIAISPQMKERFDIQAD
KLTPTELLNALLKAPVDLLWNGGIGTYVKASTESHADVGDKANDALRVNGNELRCKVVGE
GGNLGMTQLGRVEFGLNGGGSNTDFIDNAGGVDCSDHEVNIKILLNEVVHAGDMTDKQRN
QLLASMTDEVGNLVLGNNYKQTQALSLAARRAFVRIAEYKRLMNDLEGRGKLDRAIEFLP
AEEAINERLAEGHGLTRAELSVLISYSKIDLKEALLNSLVPDDDYLTRDMETAFPPTLVS
KFSAAMRRHRLKREIVSTQIANDLVNHMGITFVQRLKESTGMSPANVAGAYVIVRDIFHL
PHWFRQIEALDYQVSADVQLELMDELMRLGRRATRWFLRSRRNEQNAARDVAHFGPHLAA
LGLKLDELLEGPTREGWQTRYQAYVAAGVPELLARMVAGTTHLYTLLPIIEASDVTGQNA
ADVAKAYFAVGSALDITWYLQQISALPVENNWQALAREAFRDDVDWQQRAITISVLQQGD
GTQDVETRLALWMEEHEGMIERWRAMLVEIRAASGTDYAMYAVANRELLDLALSGQAVVP
AAATAAVSTELEPAA
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory