Comparing Pf1N1B4_5803 FitnessBrowser__pseudo1_N1B4:Pf1N1B4_5803 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
2azqA Crystal structure of catechol 1,2-dioxygenase from pseudomonas arvilla c-1 (see paper)
67% identity, 99% coverage: 3:309/309 of query aligns to 1:308/309 of 2azqA
P07773 Catechol 1,2-dioxygenase; 1,2-CTD; EC 1.13.11.1 from Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) (see paper)
56% identity, 99% coverage: 1:305/309 of query aligns to 1:308/311 of P07773
1dmhA Structure of catechol 1,2-dioxygenase from acinetobacter sp. Adp1 with bound 4-methylcatechol (see paper)
56% identity, 98% coverage: 3:305/309 of query aligns to 1:306/309 of 1dmhA
1dltA Structure of catechol 1,2-dioxygenase from acinetobacter sp. Adp1 with bound catechol (see paper)
56% identity, 98% coverage: 3:305/309 of query aligns to 1:306/309 of 1dltA
1dlmA Structure of catechol 1,2-dioxygenase from acinetobacter calcoaceticus native data (see paper)
56% identity, 98% coverage: 3:305/309 of query aligns to 1:306/309 of 1dlmA
5umhB Crystal structure of catechol 1,2-dioxygenase protein from burkholderia multivorans
52% identity, 100% coverage: 2:309/309 of query aligns to 1:309/310 of 5umhB
5td3A Crystal structure of catechol 1,2-dioxygenase from burkholderia vietnamiensis
50% identity, 98% coverage: 3:306/309 of query aligns to 1:305/307 of 5td3A
2xsrA Crystal structure of wild type acinetobacter radioresistens catechol 1,2 dioxygenase (see paper)
52% identity, 91% coverage: 27:306/309 of query aligns to 26:307/309 of 2xsrA
5vxtB Crystal structure of catechol 1,2-dioxygenase from burkholderia ambifaria
51% identity, 99% coverage: 1:306/309 of query aligns to 5:309/312 of 5vxtB
3o6rA Crystal structure of 4-chlorocatechol dioxygenase from rhodococcus opacus 1cp in complex with pyrogallol (see paper)
35% identity, 83% coverage: 34:290/309 of query aligns to 5:254/256 of 3o6rA
3o6jA Crystal structure of 4-chlorocatechol dioxygenase from rhodococcus opacus 1cp in complex with hydroxyquinol (see paper)
35% identity, 83% coverage: 34:290/309 of query aligns to 5:254/256 of 3o6jA
3o32A Crystal structure of 4-chlorocatechol dioxygenase from rhodococcus opacus 1cp in complex with 3,5-dichlorocatechol (see paper)
35% identity, 83% coverage: 34:290/309 of query aligns to 5:254/256 of 3o32A
3th1A Crystal structure of chlorocatechol 1,2-dioxygenase from pseudomonas putida
33% identity, 78% coverage: 27:266/309 of query aligns to 2:233/246 of 3th1A
3hgiA Crystal structure of catechol 1,2-dioxygenase from the gram-positive rhodococcus opacus 1cp (see paper)
38% identity, 60% coverage: 83:267/309 of query aligns to 56:244/258 of 3hgiA
3i51A Crystal structure determination of catechol 1,2-dioxygenase from rhodococcus opacus 1cp in complex with 4,5-dichlorocatechol (see paper)
38% identity, 60% coverage: 83:267/309 of query aligns to 54:242/256 of 3i51A
3i4yA Crystal structure determination of catechol 1,2-dioxygenase from rhodococcus opacus 1cp in complex with 3,5-dichlorocatechol (see paper)
38% identity, 60% coverage: 83:267/309 of query aligns to 54:242/256 of 3i4yA
Sites not aligning to the query:
3i4vA Crystal structure determination of catechol 1,2-dioxygenase from rhodococcus opacus 1cp in complex with 3-chlorocatechol (see paper)
38% identity, 60% coverage: 83:267/309 of query aligns to 54:242/256 of 3i4vA
3hjsA Crystal structure of catechol 1,2-dioxygenase from rhodococcus opacus 1cp in complex with 4-methylcatechol (see paper)
38% identity, 60% coverage: 83:267/309 of query aligns to 54:242/256 of 3hjsA
3hjqA Crystal structure of catechol 1,2-dioxygenase from rhodococcus opacus 1cp in complex with 3-methylcatechol (see paper)
38% identity, 60% coverage: 83:267/309 of query aligns to 54:242/256 of 3hjqA
3hhyA Crystal structure determination of catechol 1,2-dioxygenase from rhodococcus opacus 1cp in complex with catechol (see paper)
38% identity, 60% coverage: 83:267/309 of query aligns to 54:242/256 of 3hhyA
>Pf1N1B4_5803 FitnessBrowser__pseudo1_N1B4:Pf1N1B4_5803
MNVKISHTASAQKFLEDASGLHNEAGDPRVKALIYRILRDSVNIIEDLAVTPEEFWKAVN
YLNVLGARQEAGLVVAGLGLEHYLDLLMDAEDEQAGKAGGTPRTIEGPLYVAGAPLSEGE
ARLDDGVDPGVVLFMQGQVRNTAGEPLAGAVVDVWHANTGGTYSYFDTTQSEFNLRRRIV
TDAEGRYRFRSIVPSGYGCPPDGPTQQLLDQLGRHGQRPAHIHFFISAPDHRHLTTQINL
DGDQYLHDDFAYATRDELIAKITFSDDPQRAAAHGVSGRFAEIDFDFTLQSSAQPEEQQR
HERVRALED
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory