Comparing Pf6N2E2_2180 FitnessBrowser__pseudo6_N2E2:Pf6N2E2_2180 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 1 hits to proteins with known functional sites (download)
1yleA The structure of arginine/ornithine succinyltransferase subunit ai from pseudomonas aeruginosa.
54% identity, 100% coverage: 1:338/338 of query aligns to 3:328/330 of 1yleA
>Pf6N2E2_2180 FitnessBrowser__pseudo6_N2E2:Pf6N2E2_2180
MLALRPVQLTDLPQLQQLARDSLVGVTSLPDDTARLEEKILDSCASFEADVQGPGAENYF
FVLEDLESRRLVGCSEILSSTGYNEPFYSLRNRPFSSESRELNIQHGVPALSLCQDLNGQ
TLLRGFHIDAERVRTPESELLSRARLMFIAAHPQRFAESVITEIVGFSSEDGQSPFWDAI
GQHFFDLPYVEAERLCGLQSRTFLAELMPQYPIYVPMLPPAAQACIGRVHPDGQEAFDIL
AREGFETNNYVDIFDGGPTLHARIANVRTITQSRSATARQSLQIDARGRYLVSNDRLGNY
RAIVAELDVNDEGPVALSPDMLAALGVMDGERIRVVAL
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory