Comparing Pf6N2E2_321 FitnessBrowser__pseudo6_N2E2:Pf6N2E2_321 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 1 hits to proteins with known functional sites (download)
1us4A Putative glur0 ligand binding core with l-glutamate (see paper)
37% identity, 91% coverage: 28:316/316 of query aligns to 4:297/297 of 1us4A
>Pf6N2E2_321 FitnessBrowser__pseudo6_N2E2:Pf6N2E2_321
MRVNKHFTLLAAAAALVVSTTAQAAPVYINILTGGTSGVYYPIGVGLSQIYSSGIQDAKT
SVQATKASVENLNLLQAGRGELALALGDSVADAKNGVEDAGFKAPLTKLRAIAGAYPNYI
QIVASQESGIKTLADLKGKTVSVGAAKSGTELNARAIFKAAGLTYQDMKVQYLPFAESVD
LIKNRQLDATLQSSGLGMAAIRDLASTMALSYVAVPTDVVEKIGNPAYQSAMIPANTYDG
QAEAVPTVAITNILVTREDVPDEVAYQMTKLLFENLTRLGTSHSAAKDITLKNAAKNLPI
ALHPGAERYYKEVGAL
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory