Comparing Pf6N2E2_3296 FitnessBrowser__pseudo6_N2E2:Pf6N2E2_3296 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 1 hits to proteins with known functional sites (download)
6u7lA 2.75 angstrom crystal structure of galactarate dehydratase from escherichia coli. (see paper)
59% identity, 98% coverage: 12:517/517 of query aligns to 6:460/460 of 6u7lA
>Pf6N2E2_3296 FitnessBrowser__pseudo6_N2E2:Pf6N2E2_3296
MQLIEHADSPRYIRLHERDNVVIVVNDQGVPAGTEFPDGLVTVDFVPQSHKVTLEDIPQG
GEVIRYGQVIGYALQPIPRGSWVKEDQLRMPTAPPLDSLPLSTDVPVADAPLEGYTFEGY
RNADGTVGTRNILGITTTVQCVTGVLDHAVKRIKDELLPKYPNVDDVVALTHSYGCGVAI
TATDAYIPIRTVRNLARNPNLGGEALVISLGCEKLQAGQVMHENDSSVDLSEPWLYRLQD
SSHGFTEMIEQIMELAETRLKKLDQRRRETVPASELILGMQCGGSDAFSGITANPALGYA
SDLLLRAGATVMFSEVTEVRDAIYLLTSRAQTQEVAQELVREMDWYDRYLAKGEADRSAN
TTPGNKKGGLSNIVEKSLGSIVKSGSSAINGVLGPGERFKQKGLIFCATPASDFVCGTLQ
LAAGMNLHVFTTGRGTPYGLAMAPVVKVSTRTELAQRWPDLIDIDAGRIATGRATIEELG
WELFHYYLDVASGKKQTWAERHKLHNDITLFNPAPIT
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory