Comparing Pf6N2E2_3337 FitnessBrowser__pseudo6_N2E2:Pf6N2E2_3337 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 2 hits to proteins with known functional sites (download)
P20966 PTS system fructose-specific EIIB'BC component; EIIB'BC-Fru; EC 2.7.1.202 from Escherichia coli (strain K12) (see paper)
68% identity, 78% coverage: 117:565/575 of query aligns to 105:556/563 of P20966
O31645 PTS system mannose-specific EIIBCA component; EIIBCA-Man; EII-Man; EC 2.7.1.191 from Bacillus subtilis (strain 168) (see 2 papers)
45% identity, 78% coverage: 117:562/575 of query aligns to 2:459/650 of O31645
>Pf6N2E2_3337 FitnessBrowser__pseudo6_N2E2:Pf6N2E2_3337
VTACPNGMVTSVLCARLLDAAAQRQGWSTSVEVHDAAHPERQLSAATLEAAEWVLLVASG
PVDMSRFVGKRLFRSTPALALQDVDSVLRRGAEEAEVFLASDVVEQAPAVSTDRAPRLVA
ITACPTGVAHTFMAAEALQQAATKLGYDLQVETQGSVGARNPLSAEAIAEADVVLLATDI
EVATERFAGKKIYRCSTGIALKQAEATLNKALVEGRQESASSGASAPAKSEKTGVYKHLL
TGVSFMLPMVVAGGLMIALSFVFGIEAFKEPGTLAAALMQIGGDTAFKLMVPLLAGYIAY
SIADRPGLAPGMIGGMLASTLGAGFIGGIIAGFLAGYAAKAISRYARLPQSLEALKPILI
IPLLASLFTGLVMIYIVGKPVAGMLEALTHFLDSMGTTNAILLGVLLGAMMCVDLGGPIN
KAAYAFSVGLLASQSYAPMAATMAAGMVPPIGLGIATFIARRKFAQTEREAGKAALVLGL
CFISEGAIPFAAKDPLRVIPASIAGGALTGALSMYFGCKLMAPHGGLFVMLIPNAINHAL
LYLLAIVAGSLLTGVAYALLKRPEVVEMALEPAKA
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory