SitesBLAST
Comparing Pf6N2E2_4819 FitnessBrowser__pseudo6_N2E2:Pf6N2E2_4819 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
3bfjA Crystal structure analysis of 1,3-propanediol oxidoreductase (see paper)
44% identity, 91% coverage: 35:382/382 of query aligns to 34:382/382 of 3bfjA
P0DJA2 Alcohol dehydrogenase 2; Alcohol dehydrogenase II; ADH II; EC 1.1.1.1 from Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) (see 2 papers)
38% identity, 100% coverage: 1:382/382 of query aligns to 1:383/383 of P0DJA2
- M1 (= M1) modified: Initiator methionine, Removed
- D39 (= D39) binding NAD(+)
- N71 (≠ D69) binding NAD(+)
- G98 (= G96) binding NAD(+)
- S99 (= S97) binding NAD(+)
- T138 (= T136) binding NAD(+)
- T139 (= T137) binding NAD(+)
- T147 (= T145) binding NAD(+)
- F149 (≠ V147) binding NAD(+)
- K160 (= K158) binding NAD(+)
- L179 (≠ M177) binding NAD(+)
- G182 (≠ T180) binding NAD(+)
- M183 (≠ C181) binding NAD(+)
- D194 (= D192) binding Fe(2+)
- H198 (= H196) binding Fe(2+)
- H263 (= H261) binding Fe(2+)
- H267 (≠ Y265) binding NAD(+)
- H277 (= H275) binding Fe(2+); binding NAD(+)
3ox4A Structures of iron-dependent alcohol dehydrogenase 2 from zymomonas mobilis zm4 complexed with NAD cofactor (see paper)
38% identity, 99% coverage: 4:382/382 of query aligns to 3:382/382 of 3ox4A
- binding fe (ii) ion: D193 (= D192), H197 (= H196), H262 (= H261), H276 (= H275)
- binding nicotinamide-adenine-dinucleotide: D38 (= D39), F40 (≠ A41), M41 (≠ L42), N70 (≠ D69), G96 (= G95), G97 (= G96), S98 (= S97), T137 (= T136), T138 (= T137), F148 (≠ V147), I150 (= I149), G181 (≠ T180), M182 (≠ C181), L186 (≠ V185), H276 (= H275)
3owoA Structures of iron-dependent alcohol dehydrogenase 2 from zymomonas mobilis zm4 with and without NAD cofactor (see paper)
38% identity, 99% coverage: 4:382/382 of query aligns to 3:382/382 of 3owoA
P31005 NAD-dependent methanol dehydrogenase; MDH; MEDH; Type 3 alcohol dehydrogenase; EC 1.1.1.244 from Bacillus methanolicus (see 3 papers)
38% identity, 99% coverage: 3:381/382 of query aligns to 1:380/381 of P31005
- M1 (≠ L3) modified: Initiator methionine, Removed
- G13 (= G15) mutation to A: Shows a reduced dehydrogenase activity.
- G15 (≠ A17) mutation to A: Shows almost the same dehydrogenase activity as the wild-type.
- D88 (= D88) mutation to N: Shows almost the same dehydrogenase activity as the wild-type.
- G95 (= G95) mutation to A: Shows a 10-fold decreased affinity for NAD and NADH and a strongly reduced dehydrogenase activity. Completely insensitive to the stimulating effect of the activator protein Act.
- S97 (= S97) mutation to G: Shows an increase of the dehydrogenase activity and a decrease of the affinity for NAD and NADH. Completely insensitive to the stimulating effect of the activator protein Act. It does not bind NAD.; mutation to T: Shows an increase of the dehydrogenase activity and affinity for NAD and NADH.
- D100 (= D100) mutation to N: Loss of dehydrogenase activity. It still binds NADH.
- K103 (= K103) mutation to R: Loss of dehydrogenase activity. It does not bind NADH.
3zdrA Structure of the alcohol dehydrogenase (adh) domain of a bifunctional adhe dehydrogenase from geobacillus thermoglucosidasius ncimb 11955 (see paper)
37% identity, 100% coverage: 2:382/382 of query aligns to 1:400/403 of 3zdrA
5br4A E. Coli lactaldehyde reductase (fuco) m185c mutant (see paper)
38% identity, 96% coverage: 15:382/382 of query aligns to 15:383/385 of 5br4A
- binding nicotinamide-adenine-dinucleotide: D39 (= D39), T41 (≠ A41), L42 (= L42), P70 (= P68), G97 (= G95), G98 (= G96), S99 (= S97), D102 (= D100), T140 (= T136), T141 (= T137), T144 (= T140), T149 (= T145), N151 (≠ V147), V153 (≠ I149), K162 (= K158), G184 (≠ T180), C185 (= C181), L189 (≠ V185), H277 (= H275)
- binding zinc ion: D196 (= D192), H200 (= H196), H263 (= H261), H277 (= H275)
7qlqAAA Lactaldehyde reductase (see paper)
38% identity, 96% coverage: 15:382/382 of query aligns to 13:381/383 of 7qlqAAA
- binding adenosine-5-diphosphoribose: D37 (= D39), T39 (≠ A41), L40 (= L42), G95 (= G95), G96 (= G96), S97 (= S97), T138 (= T136), T139 (= T137), T142 (= T140), K160 (= K158), G182 (≠ T180), M183 (≠ C181), L187 (≠ V185), H275 (= H275)
- binding 2-(3,4-dimethoxyphenyl)ethanamide: G149 (≠ V147), V164 (= V162), H198 (= H196), F252 (= F252), S253 (≠ G253), H261 (= H261), C360 (≠ L361)
- binding fe (iii) ion: D194 (= D192), H198 (= H196), H261 (= H261), H275 (= H275)
2bi4A Lactaldehyde:1,2-propanediol oxidoreductase of escherichia coli (see paper)
38% identity, 96% coverage: 15:382/382 of query aligns to 14:382/382 of 2bi4A
- binding fe (iii) ion: D195 (= D192), H199 (= H196), H262 (= H261), H276 (= H275)
- binding nicotinamide-adenine-dinucleotide: D38 (= D39), T40 (≠ A41), L41 (= L42), G96 (= G95), G97 (= G96), S98 (= S97), T139 (= T136), T140 (= T137), V152 (≠ I149), K161 (= K158), G183 (≠ T180), M184 (≠ C181), L188 (≠ V185), D195 (= D192), H199 (= H196), H262 (= H261), H276 (= H275)
P0A9S1 Lactaldehyde reductase; Propanediol oxidoreductase; EC 1.1.1.77 from Escherichia coli (strain K12) (see paper)
38% identity, 96% coverage: 15:382/382 of query aligns to 14:382/382 of P0A9S1
- G16 (≠ A17) mutation to D: No effect on enzyme activity.
- D38 (= D39) mutation to G: Enzyme can now use NADP.
- G96 (= G95) mutation to E: Loss of NAD binding and enzyme activity.
- D195 (= D192) mutation to L: Complete loss of iron-binding.
- H199 (= H196) mutation H->A,F: Complete loss of iron-binding.
Sites not aligning to the query:
- 1:9 MANRMILNE→M: Loss of enzyme activity, loss of dimerization.
1rrmA Crystal structure of lactaldehyde reductase
38% identity, 96% coverage: 15:382/382 of query aligns to 14:382/385 of 1rrmA
- binding adenosine-5-diphosphoribose: D38 (= D39), T40 (≠ A41), L41 (= L42), N70 (≠ D69), G96 (= G95), G97 (= G96), S98 (= S97), T139 (= T136), T140 (= T137), T143 (= T140), V152 (≠ I149), K161 (= K158), G183 (≠ T180), M184 (≠ C181), L188 (≠ V185), H276 (= H275)
- binding fe (ii) ion: L258 (≠ V257), C361 (≠ L361)
- binding zinc ion: D195 (= D192), H199 (= H196), H262 (= H261), H276 (= H275)
7qlgAAA Lactaldehyde reductase (see paper)
38% identity, 96% coverage: 15:382/382 of query aligns to 13:381/383 of 7qlgAAA
- binding fe (iii) ion: D194 (= D192), H198 (= H196), H261 (= H261), H275 (= H275)
- binding 1,4-dihydronicotinamide adenine dinucleotide: D37 (= D39), T39 (≠ A41), L40 (= L42), N69 (≠ D69), G95 (= G95), G96 (= G96), S97 (= S97), D100 (= D100), T138 (= T136), T139 (= T137), T142 (= T140), T147 (= T145), N149 (≠ V147), K160 (= K158), L187 (≠ V185), H198 (= H196), H275 (= H275)
Q59104 4-hydroxybutyrate dehydrogenase; 4HbD; Gamma-hydroxybutyrate dehydrogenase; GHBDH; EC 1.1.1.61 from Cupriavidus necator (Alcaligenes eutrophus) (Ralstonia eutropha) (see paper)
35% identity, 94% coverage: 18:377/382 of query aligns to 16:377/382 of Q59104
- D193 (= D192) mutation to A: Retains very low activity.
- H197 (= H196) mutation to A: Loss of activity.
- H261 (= H261) mutation to A: Loss of activity.
- H265 (≠ Y265) mutation to A: 75% decrease in Vmax. Optimum pH is 9.5.; mutation to C: 95% decrease in Vmax. Optimum pH is 8.5.; mutation to D: Retains very low activity.; mutation to Y: Loss of activity.
- H280 (= H275) mutation to A: Retains very low activity.
6jkpA Crystal structure of sulfoacetaldehyde reductase from bifidobacterium kashiwanohense in complex with NAD+ (see paper)
33% identity, 90% coverage: 35:379/382 of query aligns to 35:370/376 of 6jkpA
- binding nicotinamide-adenine-dinucleotide: F42 (≠ L42), G96 (= G96), D100 (= D100), T137 (= T136), T138 (= T137), T141 (= T140), S143 (= S142), T146 (= T145), S181 (≠ T180), V182 (≠ C181), P183 (= P182)
6jkoA Crystal structure of sulfoacetaldehyde reductase from bifidobacterium kashiwanohense (see paper)
33% identity, 90% coverage: 35:379/382 of query aligns to 35:370/376 of 6jkoA
1vhdA Crystal structure of an iron containing alcohol dehydrogenase (see paper)
34% identity, 84% coverage: 60:381/382 of query aligns to 61:357/361 of 1vhdA
- binding nadp nicotinamide-adenine-dinucleotide phosphate: E69 (≠ P68), N70 (≠ D69), G96 (= G95), G97 (= G96), S98 (= S97), D101 (= D100), T137 (= T136), T138 (= T137), T141 (= T140), S143 (= S142), T146 (= T145), Y148 (≠ V147), I150 (= I149), K158 (= K158), S178 (≠ T180), M179 (≠ C181), L183 (≠ V185), D190 (= D192), H194 (= H196), H271 (= H275)
- binding zinc ion: D190 (= D192), H194 (= H196), H257 (= H261), H271 (= H275)
Sites not aligning to the query:
1o2dA Crystal structure of alcohol dehydrogenase, iron-containing (tm0920) from thermotoga maritima at 1.30 a resolution (see paper)
34% identity, 84% coverage: 60:381/382 of query aligns to 60:356/359 of 1o2dA
- binding fe (iii) ion: D189 (= D192), H193 (= H196), H256 (= H261), H270 (= H275)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: E68 (≠ P68), N69 (≠ D69), G95 (= G95), G96 (= G96), S97 (= S97), D100 (= D100), T136 (= T136), T137 (= T137), T140 (= T140), S142 (= S142), Y147 (≠ V147), I149 (= I149), K157 (= K158), S177 (≠ T180), M178 (≠ C181), L182 (≠ V185), D189 (= D192), H193 (= H196), H270 (= H275)
Sites not aligning to the query:
A0A0S1X9S7 Alcohol dehydrogenase; EC 1.1.1.1 from Thermococcus barophilus (see paper)
34% identity, 82% coverage: 69:382/382 of query aligns to 67:376/378 of A0A0S1X9S7
- D195 (= D192) mutation to A: Disrupts the overall structure of the enzyme. Lack of acetaldehyde reduction activity and displays weak ethanol oxidation activity.
- H199 (= H196) mutation to A: Disrupts the overall structure of the enzyme. Retains 10% of ethanol oxidation and acetaldehyde reduction activities.
- H262 (= H261) mutation to A: Disrupts the overall structure of the enzyme. Displays weak ethanol oxidation and acetaldehyde reduction activities.
- H266 (≠ Y265) mutation to A: Disrupts the overall structure of the enzyme. Displays higher acetaldehyde reduction activity (134%) but lower ethanol oxidation activity (36%).
- H274 (= H275) mutation to A: Disrupts the overall structure of the enzyme. Retains 20% of ethanol oxidation and acetaldehyde reduction activities.
6scgA Structure of adhe form 1 (see paper)
35% identity, 81% coverage: 35:345/382 of query aligns to 34:359/406 of 6scgA
- binding fe (iii) ion: D204 (= D192), H208 (= H196), H274 (= H261), H288 (= H275)
- binding nicotinamide-adenine-dinucleotide: D38 (= D39), F40 (≠ A41), A69 (≠ P68), D70 (= D69), G96 (= G95), G97 (= G96), S98 (= S97), T148 (= T136), T149 (= T137), T152 (= T140), V161 (≠ I149), L197 (≠ V185), H278 (≠ Y265)
P0A9Q7 Bifunctional aldehyde-alcohol dehydrogenase AdhE; Alcohol dehydrogenase E; EC 1.2.1.10; EC 1.1.1.1 from Escherichia coli (strain K12) (see 8 papers)
33% identity, 81% coverage: 35:345/382 of query aligns to 483:822/891 of P0A9Q7
- D487 (= D39) binding NAD(+)
- D519 (= D69) binding NAD(+)
- GSPMD 546:550 (≠ GSAID 96:100) binding NAD(+)
- E568 (≠ L115) mutation to K: Partially restores protein stability and resistance to MCO damage; when associated with T-267.
- V610 (≠ I149) binding NAD(+)
- K619 (= K158) binding NAD(+)
- D653 (= D192) binding Fe cation
- H657 (= H196) binding Fe cation
- F670 (≠ I209) mutation F->A,E,V: Disrupts spirosome formation. Affects the forward activity of ALDH.
- H723 (= H261) binding Fe cation
- H737 (= H275) binding Fe cation
Sites not aligning to the query:
- 1 modified: Initiator methionine, Removed
- 110:115 binding NAD(+)
- 195 binding NAD(+)
- 213 binding NAD(+)
- 267 A→T: Shows aerobic growth ability on ethanol. Shows 5-6 fold increase in acetaldehyde dehydrogenase activity, but does not affect ethanol dehydrogenase activity. Shows decreased thermal enzyme stability and increased sensitivity to MCO damage. Shows increased protein stability and resistance to MCO; when associated with K-568.
- 335 binding NAD(+)
- 358 modified: N6-acetyllysine
- 419 binding NAD(+)
- 446:449 mutation Missing: Can form dimers, but does not assemble into long filaments. Strongly affects ALDH activity, but not ADH activity.
Query Sequence
>Pf6N2E2_4819 FitnessBrowser__pseudo6_N2E2:Pf6N2E2_4819
MSLSSFKIAHKLITGAAAIEQLAAELTRLDVDNPLIVTDAALVKSGTVELALQHLGGRDY
EIFDRVMPDPEIAIVEDCMQAYRDGGHDGLIGLGGGSAIDIAKCVGVYAGYHGELQDMFG
VDQVPRKGPPMIAIPTTAGTGSEVTNVAILSDKAAQLKKGIVSDYLLPDVALVSPQMTLT
CPRGVTAASGVDALAHAIEAYLSLNASPITDALAIGAIKLISRALPKAYANPAHLQARED
MATASLMAGMAFGNAGVGAVHALAYPLGGRFHVSHGVANAMLLPYVMTWNKMACVERMRD
IAEAMGLKTAHLSDLEAADEAVEAMITLCAAVEIPQGLSSLGVTEDVIPSMAVEAAGIER
LMRNNPRKLSAADIEKIYRAAY
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SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory