Comparing Pf6N2E2_4993 FitnessBrowser__pseudo6_N2E2:Pf6N2E2_4993 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 5 hits to proteins with known functional sites (download)
7wxiA Gpr domain of drosophila p5cs filament with glutamate and atpgammas (see paper)
37% identity, 97% coverage: 4:405/415 of query aligns to 5:406/430 of 7wxiA
7wxgA Gpr domain closed form of drosophila p5cs filament with glutamate, atp, and NADPH (see paper)
37% identity, 97% coverage: 4:405/415 of query aligns to 5:406/430 of 7wxgA
4jbeB 1.95 angstrom crystal structure of gamma-glutamyl phosphate reductase from saccharomonospora viridis.
32% identity, 96% coverage: 6:404/415 of query aligns to 13:408/412 of 4jbeB
5j7iB Crystal structure of a geobacillus thermoglucosidasius acetylating aldehyde dehydrogenase in complex with adp (see paper)
22% identity, 76% coverage: 79:392/415 of query aligns to 73:426/456 of 5j7iB
5j7iC Crystal structure of a geobacillus thermoglucosidasius acetylating aldehyde dehydrogenase in complex with adp (see paper)
22% identity, 76% coverage: 79:392/415 of query aligns to 72:425/455 of 5j7iC
>Pf6N2E2_4993 FitnessBrowser__pseudo6_N2E2:Pf6N2E2_4993
MTRLGRAARQASRIIGRASTAQKNRALQAAANALDAARAELSAANELDLAAGRANGLEPA
MLERLALTPARIDGMIVGLRQVAALPDPVGAIRDMSYRPSGIQVGKMRVPLGVVGIIYES
RPNVTIDAASLCLKSGNATILRGGSEAIHSNRAIAACIQRGLAEADLPAAVVQVVETTDR
AAVGALITMPEFVDVIVPRGGKGLIERVSRDARVPVIKHLDGICHVYVSAHAELPKAQRI
AFNAKTYRYGICGAMETLLVDQAVAKDFLPSMAAQFREKGVELRGCERTRAIIEAVAATE
EDWDTEYLAPILSIRVVDGLDEAIEHINRHGSHHTDSIVSEHLGETRRFVAEVDSASVMI
NTPTCFADGFEYGLGAEIGISTDKLHARGPVGLEGLTCEKYIVVGDGQLRGQEPV
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory