SitesBLAST
Comparing PfGW456L13_2593 FitnessBrowser__pseudo13_GW456_L13:PfGW456L13_2593 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
Q4WR83 Acyl-CoA ligase sidI; Siderophore biosynthesis protein I; EC 6.2.1.- from Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) (Neosartorya fumigata) (see paper)
41% identity, 99% coverage: 3:563/565 of query aligns to 15:580/590 of Q4WR83
Sites not aligning to the query:
- 6:14 PTS2-type peroxisomal targeting signal
P69451 Long-chain-fatty-acid--CoA ligase; Long-chain acyl-CoA synthetase; Acyl-CoA synthetase; EC 6.2.1.3 from Escherichia coli (strain K12) (see paper)
32% identity, 93% coverage: 30:554/565 of query aligns to 29:551/561 of P69451
- Y213 (= Y214) mutation to A: Loss of activity.
- T214 (= T215) mutation to A: 10% of wild-type activity.
- G216 (= G217) mutation to A: Decreases activity.
- T217 (= T218) mutation to A: Decreases activity.
- G219 (= G220) mutation to A: Decreases activity.
- K222 (= K223) mutation to A: Decreases activity.
- E361 (= E360) mutation to A: Loss of activity.
4gxqA Crystal structure of atp bound rpmatb-bxbclm chimera b1 (see paper)
31% identity, 89% coverage: 51:554/565 of query aligns to 28:499/506 of 4gxqA
- active site: T163 (= T215), N183 (= N235), H207 (= H259), T303 (= T359), E304 (= E360), I403 (= I461), N408 (= N466), A491 (≠ K546)
- binding adenosine-5'-triphosphate: T163 (= T215), S164 (= S216), G165 (= G217), T166 (= T218), T167 (= T219), K171 (= K223), H207 (= H259), S277 (≠ G332), A278 (= A333), P279 (≠ T334), E298 (≠ Q353), R299 (≠ A355), Y300 (= Y356), G301 (= G357), M302 (= M358), T303 (= T359), V322 (= V381), D382 (= D440), I394 (= I452), R397 (= R455)
- binding carbonate ion: H207 (= H259), T208 (≠ C260), H209 (≠ F261), S277 (≠ G332), R299 (≠ A355), G301 (= G357), M302 (= M358), M307 (≠ L366)
P9WQ37 Long-chain-fatty-acid--CoA ligase FadD13; Fatty acyl-CoA ligase; FACL; FACL13; Fatty acyl-CoA synthetase; ACS; FACS; Very-long-chain fatty-acyl-CoA synthetase; ACSVL; EC 6.2.1.3 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 4 papers)
29% identity, 92% coverage: 38:554/565 of query aligns to 16:495/503 of P9WQ37
- R17 (≠ D39) mutation to A: Alteration of the strength of the membrane binding; when associated with A-9; A-17; A-197 and A-244.
- K172 (= K223) mutation to A: Slight reduction of the fatty acyl-CoA ligase activity. Slight increase of susceptibility to proteolysis.
- R195 (≠ T246) mutation to A: Alteration of the strength of the membrane binding; when associated with A-9; A-17; A-197 and A-244.
- R197 (≠ A248) mutation to A: Alteration of the strength of the membrane binding; when associated with A-9; A-17; A-195 and A-244.
- V209 (≠ C260) mutation to D: Strong reduction of the fatty acyl-CoA ligase activity. No significant change in the total expression level, however the cytoplasmic expression is reduced. Slight increase of susceptibility to proteolysis.
- A211 (≠ G262) mutation to G: Slight increase of the fatty acyl-CoA ligase activity. Reduced rate of proteolytic degradation.
- T214 (≠ M265) mutation to W: Shows a marked decrease in the activity with lauric and palmitic acid (C12 and C16 fatty acid) with a simultaneous increase in the activity with caprylic acid (C8 fatty acid).
- R244 (≠ K297) mutation to A: Alteration of the strength of the membrane binding; when associated with A-17; A-195; A-195 and A-197.
- A302 (≠ G357) mutation to G: Slight increase of the fatty acyl-CoA ligase activity. Reduced rate of proteolytic degradation.; mutation to W: Does not show activity with small, medium or long acyl chains.
- W377 (= W435) mutation to A: Strong reduction of the fatty acyl-CoA ligase activity. Enhanced affinity towards palmitic acid binding. No significant change in the total expression level, however the cytoplasmic expression is low. Slight increase of susceptibility to proteolysis.
- D382 (= D440) mutation to A: Strong reduction of the fatty acyl-CoA ligase activity. No significant change in the total expression level, however the cytoplasmic expression is reduced.
- R397 (= R455) mutation to A: Reduction of binding affinity for fatty acids.
- S404 (≠ R462) mutation to A: Slight reduction of the fatty acyl-CoA ligase activity. Enhanced affinity towards palmitic acid binding.
- G406 (= G464) mutation to L: No effect on the formation of acyl-adenylate intermediate. However, it shows very poor catalytic efficiency to form acyl-CoA.
- K487 (= K546) mutation to A: Strong reduction of the fatty acyl-CoA ligase activity. Reduction of binding affinity for ATP.
Sites not aligning to the query:
- 9 R→A: Alteration of the strength of the membrane binding; when associated with A-9; A-195; A-197 and A-244.
3r44A Mycobacterium tuberculosis fatty acyl coa synthetase (see paper)
28% identity, 92% coverage: 38:554/565 of query aligns to 19:495/502 of 3r44A
Sites not aligning to the query:
6k4cA Ancestral luciferase anclamp in complex with dlsa (see paper)
28% identity, 92% coverage: 35:555/565 of query aligns to 32:536/538 of 6k4cA
- binding 5'-o-[n-(dehydroluciferyl)-sulfamoyl] adenosine: H243 (= H259), F245 (= F261), T249 (≠ M265), G313 (≠ A331), G314 (= G332), A315 (= A333), P316 (≠ T334), R335 (≠ Q353), G337 (≠ A355), Y338 (= Y356), G339 (= G357), L340 (≠ M358), T341 (= T359), S345 (≠ P363), A346 (≠ V364), D420 (= D440), I432 (= I452), R435 (= R455), K527 (= K546)
6k4dA Ancestral luciferase anclamp in complex with atp and d-luciferin (see paper)
28% identity, 92% coverage: 35:555/565 of query aligns to 32:536/539 of 6k4dA
- binding [[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] (4S)-2-(6-oxidanyl-1,3-benzothiazol-2-yl)-4,5-dihydro-1,3-thiazole-4-carboxylate: H243 (= H259), G244 (≠ C260), F245 (= F261), T249 (≠ M265), L284 (≠ Y302), S312 (≠ M330), G313 (≠ A331), G314 (= G332), A315 (= A333), P316 (≠ T334), Q336 (≠ I354), G337 (≠ A355), Y338 (= Y356), G339 (= G357), L340 (≠ M358), T341 (= T359), S345 (≠ P363), A346 (≠ V364), T360 (≠ V381), D420 (= D440), I432 (= I452), R435 (= R455), K527 (= K546)
- binding (4S)-2-(6-hydroxy-1,3-benzothiazol-2-yl)-4,5-dihydro-1,3-thiazole-4-carboxylic acid: R216 (≠ N235), F245 (= F261), T249 (≠ M265), L284 (≠ Y302), S312 (≠ M330), G313 (≠ A331), G314 (= G332), R335 (≠ Q353), G337 (≠ A355), G339 (= G357), L340 (≠ M358), T341 (= T359), S345 (≠ P363), A346 (≠ V364)
Q84P21 Peroxisomal OPC-8:0-CoA ligase 1; 4-coumarate--CoA ligase isoform 9; At4CL9; 4-coumarate--CoA ligase-like 5; EC 6.2.1.- from Arabidopsis thaliana (Mouse-ear cress) (see paper)
25% identity, 89% coverage: 53:556/565 of query aligns to 59:540/546 of Q84P21
- K530 (= K546) mutation to N: Lossed enzymatic activity.
4wv3B Crystal structure of the anthranilate coa ligase auaeii in complex with anthranoyl-amp (see paper)
29% identity, 89% coverage: 53:553/565 of query aligns to 37:509/518 of 4wv3B