SitesBLAST

SitesBLAST – Find functional sites

SitesBLAST

Comparing PfGW456L13_2701 FitnessBrowser__pseudo13_GW456_L13:PfGW456L13_2701 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 20 (the maximum) hits to proteins with known functional sites (download)

P00053 Cytochrome c from Cannabis sativa (Hemp) (Marijuana)
46% identity, 77% coverage: 26:124/129 of query aligns to 9:107/111 of P00053

query
sites
P00053

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K80 (= K97) modified: N6,N6,N6-trimethyllysine
K94 (≠ S111) modified: N6,N6,N6-trimethyllysine

Sites not aligning to the query:

1 modified: N-acetylalanine

P00069 Cytochrome c from Guizotia abyssinica (Niger) (Ramtilla)
46% identity, 78% coverage: 25:124/129 of query aligns to 8:107/111 of P00069

query
sites
P00069

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K80 (= K97) modified: N6,N6,N6-trimethyllysine
K94 (≠ S111) modified: N6,N6,N6-trimethyllysine

Sites not aligning to the query:

1 modified: N-acetylalanine

P00028 Cytochrome c from Entosphenus tridentatus (Pacific lamprey) (Lampetra tridentata) (see paper)
44% identity, 77% coverage: 26:124/129 of query aligns to 2:100/105 of P00028

query
sites
P00028

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G2 (= G26) modified: N-acetylglycine
C15 (= C39) binding covalent
C18 (= C42) binding covalent

Sites not aligning to the query:

1 modified: Initiator methionine, Removed

P00054 Cytochrome c from Sesamum indicum (Oriental sesame) (Sesamum orientale) (see paper)
45% identity, 77% coverage: 26:124/129 of query aligns to 9:107/111 of P00054

query
sites
P00054

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C22 (= C39) binding covalent
C25 (= C42) binding covalent
K80 (= K97) modified: N6,N6,N6-trimethyllysine
K94 (≠ S111) modified: N6,N6,N6-trimethyllysine

Sites not aligning to the query:

1 modified: N-acetylalanine

P00067 Cytochrome c from Tropaeolum majus (Common nasturtium) (Indian cress) (see paper)
46% identity, 78% coverage: 25:124/129 of query aligns to 8:107/111 of P00067

query
sites
P00067

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K80 (= K97) modified: N6,N6,N6-trimethyllysine
K94 (≠ S111) modified: N6,N6,N6-trimethyllysine

Sites not aligning to the query:

1 modified: N-acetylalanine

P00038 Cytochrome c from Apis mellifera (Honeybee) (see paper)
42% identity, 79% coverage: 23:124/129 of query aligns to 3:104/108 of P00038

query
sites
P00038

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C19 (= C39) binding covalent
C22 (= C42) binding covalent

Sites not aligning to the query:

1 modified: Initiator methionine, Removed

1co6A Crystal structure of ferrocytochrome c2 from rhodopseudomonas viridis (see paper)
44% identity, 79% coverage: 27:128/129 of query aligns to 2:102/107 of 1co6A

query
sites
1co6A

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binding heme c: C13 (= C39), C16 (= C42), H17 (= H43), P29 (= P55), S39 (= S65), Y47 (= Y73), S48 (= S74), N51 (≠ M77), W58 (= W84), F63 (≠ L89), I67 (≠ L93), T77 (= T103), K78 (≠ R104), M79 (= M105), F81 (= F107)

P00070 Cytochrome c from Helianthus annuus (Common sunflower) (see paper)
45% identity, 78% coverage: 25:125/129 of query aligns to 9:109/112 of P00070

query
sites
P00070

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C23 (= C39) binding covalent
C26 (= C42) binding covalent
K81 (= K97) modified: N6,N6,N6-trimethyllysine
K95 (≠ S111) modified: N6,N6,N6-trimethyllysine

Sites not aligning to the query:

1 modified: Initiator methionine, Removed
2 modified: N-acetylalanine

P00072 Cytochrome c from Fagopyrum esculentum (Common buckwheat) (Polygonum fagopyrum) (see paper)
44% identity, 77% coverage: 26:124/129 of query aligns to 9:107/111 of P00072

query
sites
P00072

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K80 (= K97) modified: N6,N6,N6-trimethyllysine
K94 (≠ S111) modified: N6,N6,N6-trimethyllysine

Sites not aligning to the query:

1 modified: N-acetylalanine

P00061 Cytochrome c from Solanum tuberosum (Potato) (see paper)
45% identity, 77% coverage: 26:124/129 of query aligns to 9:107/111 of P00061

query
sites
P00061

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Sites not aligning to the query:

1 modified: N-acetylalanine

P00057 Cytochrome c from Ricinus communis (Castor bean) (see paper)
46% identity, 77% coverage: 26:124/129 of query aligns to 9:107/111 of P00057

query
sites
P00057

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K

D

K

P

P

E

Q

K

D

I

R

E

A

D

D

L

L

L

I

A

A

Y

Y

L

L

Q

K

C22 (= C39) binding covalent
C25 (= C42) binding covalent
P79 (= P96) modified: 4-hydroxyproline; partial
K80 (= K97) modified: N6,N6,N6-trimethyllysine
K94 (≠ S111) modified: N6,N6,N6-trimethyllysine

Sites not aligning to the query:

1 modified: N-acetylalanine

Q0DI31 Cytochrome c from Oryza sativa subsp. japonica (Rice) (see paper)
44% identity, 77% coverage: 26:124/129 of query aligns to 10:108/112 of Q0DI31

query
sites
Q0DI31

G

G

D

N

V

P

Q

K

A

A

G

G

E

E

K

K

V

I

Y

F

K

K

R

T

L

K

C

C

S

A

G

Q

C

C

H

H

Q

T

I

V

G

D

E

K

S

G

A

A

R

G

A

H

F

K

F

Q

G

G

P

P

Q

N

L

L

N

N

G

G

V

L

I

F

G

G

R

R

H

Q

S

S

A

G

V

T

T

T

T

P

D

G

Y

Y

V

S

Y

Y

S

S

D

T

A

A

M

N

K

K

S

N

A

M

N

A

L

V

V

I

W

W

D

E

R

E

E

N

T

T

L

L

I

Y

A

D

Y

Y

L

L

E

L

A

N

P

P

K
|
K

K

K

V

Y

V

I

P

P

G

G

T

T

R

K

M

M

I

V

F

F

W

P

G

G

L

L

S
x
K

D

K

P

P

E

Q

K

E

I

R

E

A

D

D

L

L

L

I

A

S

Y

Y

L

L

Q

K

K81 (= K97) modified: N6,N6,N6-trimethyllysine
K95 (≠ S111) modified: N6,N6,N6-trimethyllysine

Sites not aligning to the query:

1 modified: Initiator methionine, Removed
2 modified: N-acetylalanine

P00051 Cytochrome c from Cucurbita maxima (Pumpkin) (Winter squash) (see paper)
45% identity, 77% coverage: 26:124/129 of query aligns to 9:107/111 of P00051

query
sites
P00051

G

G

D

N

V

S

Q

K

A

A

G

G

E

E

K

K

V

I

Y

F

K

K

R

T

L

K

C

C

S

A

G

Q

C

C

H

H

Q

T

I

V

G

D

E

K

S

G

A

A

R

G

A

H

F

K

F

Q

G

G

P

P

Q

N

L

L

N

N

G

G

V

L

I

F

G

G

R

R

H

Q

S

S

A

G

V

T

T

T

T

P

D

G

Y

Y

V

S

Y

Y

S

S

D

A

A

A

M

N

K

K

S

N

A

R

N

A

L

V

V

I

W

W

D

E

R

E

E

K

T

T

L

L

I

Y

A

D

Y

Y

L

L

E

L

A

N

P

P

K
|
K

K

K

V

Y

V

I

P

P

G

G

T

T

R

K

M

M

I

V

F

F

W

P

G

G

L

L

S
x
K

D

K

P

P

E

Q

K

D

I

R

E

A

D

D

L

L

L

I

A

A

Y

Y

L

L

Q

K

K80 (= K97) modified: N6,N6,N6-trimethyllysine
K94 (≠ S111) modified: N6,N6,N6-trimethyllysine

Sites not aligning to the query:

1 modified: N-acetylalanine

P00052 Cytochrome c from Vigna radiata var. radiata (Mung bean) (Phaseolus aureus) (see paper)
44% identity, 77% coverage: 26:124/129 of query aligns to 9:107/111 of P00052

query
sites
P00052

G

G

D

N

V

S

Q

K

A

S

G

G

E

E

K

K

V

I

Y

F

K

K

R

T

L

K

C

C

S

A

G

Q

C

C

H

H

Q

T

I

V

G

D

E

K

S

G

A

A

R

G

A

H

F

K

F

Q

G

G

P

P

Q

N

L

L

N

N

G

G

V

L

I

F

G

G

R

R

H

Q

S

S

A

G

V

T

T

T

T

A

D

G

Y

Y

V

S

Y

Y

S

S

D

T

A

A

M

N

K

K

S

N

A

M

N

A

L

V

V

I

W

W

D

E

R

E

E

K

T

T

L

L

I

Y

A

D

Y

Y

L

L

E

L

A

N

P

P

K
|
K

K

K

V

Y

V

I

P

P

G

G

T

T

R

K

M

M

I

V

F

F

W

P

G

G

L

L

S
x
K

D

K

P

P

E

Q

K

D

I

R

E

A

D

D

L

L

L

I

A

A

Y

Y

L

L

Q

K

K80 (= K97) modified: N6,N6,N6-trimethyllysine
K94 (≠ S111) modified: N6,N6,N6-trimethyllysine

Sites not aligning to the query:

1 modified: N-acetylalanine

P00083 Cytochrome c2 from Blastochloris viridis (Rhodopseudomonas viridis) (see 2 papers)
44% identity, 77% coverage: 30:128/129 of query aligns to 25:122/127 of P00083

query
sites
P00083

A
x
S

G
|
G

E
|
E

K
x
Q

V
|
V

Y
x
F

K
|
K

R
x
Q

L

-

C
|
C

S
x
L

G
x
V

C
|
C

H
|
H

Q
x
S

I
|
I

G
|
G

E
x
P

S
x
G

A
|
A

R
x
K

A
x
N

F
x
K

F
x
V

G
|
G

P
|
P

Q
x
V

L
|
L

N
|
N

G
|
G

V
x
L

I
x
F

G
|
G

R
|
R

H
|
H

S
|
S

A
x
G

V
x
T

T
x
I

T
x
E

D
x
G

Y
x
F

V
x
A

Y
|
Y

S
|
S

D
|
D

A
|
A

M
x
N

K
|
K

S
x
N

A
x
S

N
x
G

L
x
I

V
x
T

W
|
W

D
x
T

R
x
E

E
|
E

T
x
V

L
x
F

I
x
R

A
x
E

Y
|
Y

L
x
I

E
x
R

A
x
D

P
|
P

K
|
K

K
x
A

V
x
K

V
x
I

P
|
P

G
|
G

T
|
T

R
x
K

M
|
M

I
|
I

F
|
F

W
x
A

G
|
G

L
x
V

S
x
K

D
|
D

P
x
E

E
x
Q

K
|
K

I
x
V

E
x
S

D
|
D

L
|
L

L
x
I

A
|
A

Y
|
Y

L
x
I

Q
x
K

T
x
Q

F
|
F

P
x
N

A
|
A

C33 (= C39) binding covalent
C36 (= C42) binding covalent
H37 (= H43) binding axial binding residue
M99 (= M105) binding axial binding residue

Sites not aligning to the query:

1:20 signal peptide
21 modified: Pyrrolidone carboxylic acid
21:127 modified: mature protein, Cytochrome c2

1ccrA Structure of rice ferricytochromE C at 2.0 angstroms resolution (see paper)
44% identity, 77% coverage: 26:124/129 of query aligns to 9:107/111 of 1ccrA

query
sites
1ccrA

G

G

D

N

V

P

Q

K

A

A

G

G

E

E

K

K

V

I

Y

F

K

K

R

T

L
x
K

C
|
C

S

A

G

Q

C
|
C

H
|
H

Q

T

I

V

G

D

E

K

S

G

A

A

R

G

A

H

F

K

F
x
Q

G
|
G

P
|
P

Q

N

L

L

N

N

G

G

V

L

I

F

G

G

R

R

H

Q

S
|
S

A

G

V

T

T

T

T

P

D

G

Y
|
Y

V

S

Y
|
Y

S
|
S

D

T

A

A

M
x
D

K

K

S

N

A

M

N

A

L

V

V

I

W
|
W

D

E

R

E

E

N

T

T

L

L

I

Y

A

D

Y
|
Y

L

L

E

L

A

N

P

P

K

K

K

K

V

Y

V

I

P

P

G

G

T
|
T

R
x
K

M
|
M

I

V

F
|
F

W

P

G

G

L

L

S

K

D

K

P

P

E

Q

K

E

I

R

E

A

D

D

L

L

L

I

A

S

Y

Y

L

L

Q

K

binding heme c: K21 (≠ L38), C22 (= C39), C25 (= C42), H26 (= H43), Q36 (≠ F53), G37 (= G54), P38 (= P55), S48 (= S65), Y54 (= Y71), Y56 (= Y73), S57 (= S74), D60 (≠ M77), W67 (= W84), Y75 (= Y92), T86 (= T103), K87 (≠ R104), M88 (= M105), F90 (= F107)

P00004 Cytochrome c from Equus caballus (Horse) (see 2 papers)
41% identity, 77% coverage: 26:124/129 of query aligns to 2:100/105 of P00004

query
sites
P00004

G
|
G

D

D

V

V

Q

E

A

K

G

G

E

K

K

K

V

I

Y

F

K

V

R

Q

L

K

C

C

S

A

G

Q

C

C

H
|
H

Q

T

I

V

G

E

E

K

S

G

A

G

R

K

A

H

F

K

F

T

G

G

P

P

Q

N

L

L

N

H

G

G

V

L

I

F

G

G

R

R

H

K

S

T

A

G

V

Q

T

A

T

P

D

G

Y

F

V

T

Y

Y

S

T

D

D

A

A

M

N

K

K

S

N

A

K

N

G

L

I

V

T

W

W

D

K

R

E

E

E

T

T

L

L

I

M

A

E

Y

Y

L

L

E

E

A

N

P

P

K

K

K

K

V

Y

V

I

P

P

G

G

T

T

R

K

M

M

I

I

F

F

W

A

G

G

L

I

S

K

D

K

P

K

E

T

K

E

I

R

E

E

D

D

L

L

L

I

A

A

Y

Y

L

L

Q

K

G2 (= G26) modified: N-acetylglycine
H19 (= H43) binding axial binding residue

Sites not aligning to the query:

1 modified: Initiator methionine, Removed

P00062 Cytochrome c from Sambucus nigra (European elder) (see paper)
45% identity, 77% coverage: 26:124/129 of query aligns to 9:107/111 of P00062

query
sites
P00062

G

G

D

N

V

P

Q

K

A

A

G

G

E

E

K

K

V

I

Y

F

K

K

R

T

L

K

C

C

S

N

G

Q

C

C

H

H

Q

T

I

V

G

D

E

K

S

G

A

A

R

G

A

H

F

K

F

Q

G

G

P

P

Q

N

L

L

N

N

G

G

V

L

I

F

G

G

R

R

H

Q

S

S

A

G

V

T

T

T

T

A

D

G

Y

Y

V

S

Y

Y

S

S

D

A

A

A

M

N

K

K

S

N

A

M

N

A

L

V

V

N

W

W

D

E

R

E

E

K

T

T

L

L

I

Y

A

D

Y

Y

L

L

E

L

A

N

P

P

K
|
K

K

K

V

Y

V

I

P

P

G

G

T

T

R

K

M

M

I

V

F

F

W

P

G

G

L

L

S
x
K

D

K

P

P

E

Q

K

D

I

R

E

A

D

D

L

L

L

I

A

A

Y

Y

L

L

Q

K

K80 (= K97) modified: N6,N6,N6-trimethyllysine
K94 (≠ S111) modified: N6,N6,N6-trimethyllysine

Sites not aligning to the query:

1 modified: N-acetylalanine

P62773 Cytochrome c from Brassica oleracea (Wild cabbage) (see paper)
45% identity, 77% coverage: 26:124/129 of query aligns to 9:107/111 of P62773

query
sites
P62773

G

G

D

N

V

S

Q

K

A

A

G

G

E

E

K

K

V

I

Y

F

K

K

R

T

L

K

C

C

S

A

G

Q

C

C

H

H

Q

T

I

V

G

D

E

K

S

G

A

A

R

G

A

H

F

K

F

Q

G

G

P

P

Q

N

L

L

N

N

G

G

V

L

I

F

G

G

R

R

H

Q

S

S

A

G

V

T

T

T

T

A

D

G

Y

Y

V

S

Y

Y

S

S

D

A

A

A

M

N

K

K

S

N

A

K

N

A

L

V

V

E

W

W

D

E

R

E

E

K

T

T

L

L

I

Y

A

D

Y

Y

L

L

E

L

A

N

P

P

K
|
K

K

K

V

Y

V

I

P

P

G

G

T

T

R

K

M

M

I

V

F

F

W

P

G

G

L

L

S
x
K

D

K

P

P

E

Q

K

D

I

R

E

A

D

D

L

L

L

I

A

A

Y

Y

L

L

Q

K

K80 (= K97) modified: N6,N6,N6-trimethyllysine
K94 (≠ S111) modified: N6,N6,N6-trimethyllysine

Sites not aligning to the query:

1 modified: N-acetylalanine

P62772 Cytochrome c from Brassica napus (Rape) (see paper)
45% identity, 77% coverage: 26:124/129 of query aligns to 9:107/111 of P62772

query
sites
P62772

G

G

D

N

V

S

Q

K

A

A

G

G

E

E

K

K

V

I

Y

F

K

K

R

T

L

K

C

C

S

A

G

Q

C

C

H

H

Q

T

I

V

G

D

E

K

S

G

A

A

R

G

A

H

F

K

F

Q

G

G

P

P

Q

N

L

L

N

N

G

G

V

L

I

F

G

G

R

R

H

Q

S

S

A

G

V

T

T

T

T

A

D

G

Y

Y

V

S

Y

Y

S

S

D

A

A

A

M

N

K

K

S

N

A

K

N

A

L

V

V

E

W

W

D

E

R

E

E

K

T

T

L

L

I

Y

A

D

Y

Y

L

L

E

L

A

N

P

P

K
|
K

K

K

V

Y

V

I

P

P

G

G

T

T

R

K

M

M

I

V

F

F

W

P

G

G

L

L

S
x
K

D

K

P

P

E

Q

K

D

I

R

E

A

D

D

L

L

L

I

A

A

Y

Y

L

L

Q

K

K80 (= K97) modified: N6,N6,N6-trimethyllysine
K94 (≠ S111) modified: N6,N6,N6-trimethyllysine

Sites not aligning to the query:

1 modified: N-acetylalanine
109 A → S: in 40% of the molecules

Query Sequence

>PfGW456L13_2701 FitnessBrowser__pseudo13_GW456_L13:PfGW456L13_2701
MKKLAALTLASALTAGLFSTPTLAAGDVQAGEKVYKRLCSGCHQIGESARAFFGPQLNGV
IGRHSAVTTDYVYSDAMKSANLVWDRETLIAYLEAPKKVVPGTRMIFWGLSDPEKIEDLL
AYLQTFPAQ

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory